Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90580 | Canola | plasma membrane | 98.96 | 98.96 |
| AT4G15610.1 | Thale cress | plasma membrane | 75.13 | 75.13 |
| GSMUA_Achr5P00430_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 48.7 | 49.21 |
| KRH02202 | Soybean | golgi, plasma membrane, vacuole | 47.67 | 47.67 |
| KRH50921 | Soybean | plasma membrane | 47.15 | 47.15 |
| GSMUA_Achr9P30950_001 | Banana | plasma membrane | 50.26 | 46.86 |
| PGSC0003DMT400058342 | Potato | cytosol | 47.67 | 46.7 |
| VIT_05s0020g01830.t01 | Wine grape | cytosol | 50.26 | 46.63 |
| Solyc01g067300.2.1 | Tomato | cytosol | 47.15 | 46.43 |
| CDX76993 | Canola | plasma membrane | 44.56 | 41.95 |
| CDY05260 | Canola | plasma membrane | 44.56 | 41.95 |
| Zm00001d019457_P001 | Maize | endoplasmic reticulum, plasma membrane, plastid, vacuole | 42.49 | 41.84 |
| CDY24696 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 44.04 | 41.46 |
| KRH21024 | Soybean | cytosol, plasma membrane, vacuole | 40.41 | 41.27 |
| EER98393 | Sorghum | endoplasmic reticulum, plasma membrane, plastid, vacuole | 40.93 | 39.3 |
| TraesCS1A01G248700.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid, vacuole | 38.34 | 39.15 |
| TraesCS1D01G248200.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid, vacuole | 38.34 | 39.15 |
| Zm00001d005158_P001 | Maize | extracellular | 40.41 | 38.42 |
| TraesCS1B01G259400.1 | Wheat | plasma membrane | 37.31 | 38.1 |
| Os07t0442900-01 | Rice | plasma membrane | 37.31 | 34.78 |
| HORVU1Hr1G062380.3 | Barley | plastid | 38.86 | 34.56 |
| CDY48566 | Canola | extracellular, plasma membrane | 27.98 | 32.93 |
| CDY21972 | Canola | extracellular, plasma membrane | 27.46 | 32.32 |
| CDX89875 | Canola | extracellular, plasma membrane, vacuole | 24.87 | 29.27 |
| CDY18177 | Canola | extracellular, plasma membrane, vacuole | 24.87 | 29.27 |
| CDX90578 | Canola | plasma membrane | 27.98 | 28.42 |
| CDY09749 | Canola | plasma membrane | 27.98 | 28.42 |
| CDY63706 | Canola | endoplasmic reticulum, plasma membrane, plastid | 28.5 | 27.78 |
| CDY49020 | Canola | plasma membrane | 28.5 | 27.64 |
| CDY70062 | Canola | extracellular | 17.1 | 27.5 |
| CDY14930 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 27.98 | 27.27 |
| CDY49491 | Canola | plasma membrane | 27.98 | 27.14 |
| CDX76458 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 27.98 | 27.14 |
| CDY31439 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 27.46 | 26.63 |
| CDY22743 | Canola | plasma membrane | 25.39 | 25.79 |
| CDY09075 | Canola | plasma membrane | 25.39 | 25.79 |
| CDY03385 | Canola | plasma membrane | 20.73 | 23.67 |
| CDY34336 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 20.21 | 23.08 |
| CDY08965 | Canola | extracellular, plasma membrane, vacuole | 13.99 | 22.88 |
| CDX92668 | Canola | extracellular, plasma membrane, vacuole | 19.17 | 21.76 |
| CDY11050 | Canola | cytosol | 15.03 | 21.01 |
Protein Annotations
| EnsemblPlants:CDY09750 | EnsemblPlantsGene:GSBRNA2T00031445001 | GO:A0A078F5M5 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:CASP/CASPL | InterPro:CASP_dom | PANTHER:PTHR11615 | PANTHER:PTHR11615:SF150 |
| PFAM:PF04535 | ProteinID:CDY09750 | ProteinID:CDY09750.1 | SEG:seg | TIGRFAMs:TIGR01569 | TMHMM:TMhelix |
| UniParc:UPI0001CABF51 | UniProt:A0A078F5M5 | MapMan:35.1 | : | : | : |
Description
BnaC07g33110DCASP-like protein [Source:UniProtKB/TrEMBL;Acc:A0A078F5M5]
Coordinates
chrLK031998:-:810020..812319
Molecular Weight (calculated)
20670.7 Da
IEP (calculated)
9.898
GRAVY (calculated)
0.740
Length
193 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSDETKSTI DTEKTTVPGG SCTTSKSCWM VQVVLRLFLF AATLTSIVVM VTSKQSKTIP IFPFHTQAKF THSPAFIYFV VALSVACFYS IISTLATLSA
101: FKKPSSCSAI LLLNLAIMDA VMVGIVASAT GASGGVAYIG LKGNKNVQWR KICDLYDTFC RHVGGAIAVS LVASIILLLL SIISVLSLYK RIR
101: FKKPSSCSAI LLLNLAIMDA VMVGIVASAT GASGGVAYIG LKGNKNVQWR KICDLYDTFC RHVGGAIAVS LVASIILLLL SIISVLSLYK RIR
001: MGYETKSTLD TERSTAPGTG TTTKSCSMTQ VVLRFVLFAA TLTSIVVMVT SKQTKNIFLP GTPIRIPAAE FTNSPALIYF VVALSVACFY SIVSTFVTVS
101: AFKKHSCSAV LLLNLAIMDA VMVGIVASAT GAGGGVAYLG LKGNKEVRWG KICHIYDKFC RHVGGAIAVS LFASVVLLLL SIISVLSLYK KIR
101: AFKKHSCSAV LLLNLAIMDA VMVGIVASAT GAGGGVAYLG LKGNKEVRWG KICHIYDKFC RHVGGAIAVS LFASVVLLLL SIISVLSLYK KIR
Arabidopsis Description
CASP-like protein 1D1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE29]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.