Subcellular Localization
min:
: max
Winner_takes_all: vacuole, plasma membrane, endoplasmic reticulum, mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- endoplasmic reticulum 2
- extracellular 1
- golgi 1
- plasma membrane 2
- vacuole 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31439 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 95.98 | 95.98 |
| AT4G20390.1 | Thale cress | extracellular, mitochondrion, plasma membrane, vacuole | 82.41 | 83.25 |
| CDY49491 | Canola | plasma membrane | 70.85 | 70.85 |
| CDY49020 | Canola | plasma membrane | 70.35 | 70.35 |
| CDY14930 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 69.85 | 70.2 |
| CDY63706 | Canola | endoplasmic reticulum, plasma membrane, plastid | 69.85 | 70.2 |
| KRH37705 | Soybean | extracellular, plasma membrane, plastid, vacuole | 48.74 | 51.32 |
| Solyc02g069730.2.1 | Tomato | plasma membrane | 49.75 | 50.77 |
| VIT_10s0092g00220.t01 | Wine grape | cytosol, plasma membrane, vacuole | 50.25 | 49.02 |
| PGSC0003DMT400054615 | Potato | plasma membrane | 48.24 | 48.24 |
| KRH12746 | Soybean | cytosol, plasma membrane, vacuole | 48.24 | 47.76 |
| KRH43078 | Soybean | peroxisome, plasma membrane, plastid, vacuole | 45.73 | 46.91 |
| Os12t0610800-01 | Rice | plasma membrane | 40.2 | 41.03 |
| KRH59207 | Soybean | extracellular, plasma membrane, vacuole | 47.24 | 40.34 |
| GSMUA_Achr7P08030_001 | Banana | plasma membrane | 40.2 | 39.41 |
| TraesCS5B01G054100.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 37.19 | 37.76 |
| Zm00001d031047_P001 | Maize | cytosol, peroxisome, plasma membrane, plastid | 38.19 | 37.07 |
| EES17365 | Sorghum | plastid | 39.2 | 36.97 |
| TraesCS5A01G049000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 36.18 | 36.73 |
| TraesCS5D01G059600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 36.18 | 36.73 |
| CDY21972 | Canola | extracellular, plasma membrane | 29.65 | 35.98 |
| CDY48566 | Canola | extracellular, plasma membrane | 29.15 | 35.37 |
| CDY18177 | Canola | extracellular, plasma membrane, vacuole | 28.64 | 34.76 |
| CDX89875 | Canola | extracellular, plasma membrane, vacuole | 28.64 | 34.76 |
| CDY70062 | Canola | extracellular | 18.09 | 30.0 |
| CDY09750 | Canola | plasma membrane | 27.14 | 27.98 |
| CDX90580 | Canola | plasma membrane | 27.14 | 27.98 |
| CDY22743 | Canola | plasma membrane | 25.13 | 26.32 |
| CDY09075 | Canola | plasma membrane | 24.62 | 25.79 |
| CDX90578 | Canola | plasma membrane | 24.62 | 25.79 |
| CDY09749 | Canola | plasma membrane | 24.62 | 25.79 |
| CDY03385 | Canola | plasma membrane | 21.61 | 25.44 |
| CDY08965 | Canola | extracellular, plasma membrane, vacuole | 14.57 | 24.58 |
| CDY34336 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 20.6 | 24.26 |
| CDY05260 | Canola | plasma membrane | 24.12 | 23.41 |
| CDX76993 | Canola | plasma membrane | 24.12 | 23.41 |
| CDY24696 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 23.62 | 22.93 |
| CDX92668 | Canola | extracellular, plasma membrane, vacuole | 19.1 | 22.35 |
| CDY11050 | Canola | cytosol | 15.08 | 21.74 |
Protein Annotations
| EnsemblPlants:CDX76458 | EnsemblPlantsGene:GSBRNA2T00126869001 | GO:A0A078CMZ8 | InterPro:CASP/CASPL | InterPro:CASP_dom | PANTHER:PTHR11615 |
| PANTHER:PTHR11615:SF120 | PFAM:PF04535 | ProteinID:CDX76458 | ProteinID:CDX76458.1 | SEG:seg | TIGRFAMs:TIGR01569 |
| TMHMM:TMhelix | UniParc:UPI0004EEE47E | MapMan:35.1 | : | : | : |
Description
BnaA08g09420D
Coordinates
chrLK031807:-:1315906..1316686
Molecular Weight (calculated)
21239.5 Da
IEP (calculated)
10.841
GRAVY (calculated)
0.681
Length
199 amino acids
Sequence
(BLAST)
(BLAST)
001: MPREKILFAG GGTTKSWKVL LALRILAFIA TLAAAIVMGL NKETKTLVVA TIGTVPIKAT LTAKFQDTPA FVFFVIANAM VSFHNLLMIA LQIFSRKLEY
101: KGFRLLSVAI LDMLNATLVS AAANAAVFIA ELGKNGNKHA KWNKVCDRFS IYCDHGRGAL IAAFSGVILM LLVSAVSISR LSIYSNKSST STAAAVASP
101: KGFRLLSVAI LDMLNATLVS AAANAAVFIA ELGKNGNKHA KWNKVCDRFS IYCDHGRGAL IAAFSGVILM LLVSAVSISR LSIYSNKSST STAAAVASP
001: MAREKIVVAG GTTKSWKLLL GLRIFAFMAT LAAAIVMSLN KETKTLVVAT IGTVPIKATL TAKFQHTPAF VFFVIANVMV SFHNLLMIVV QIFSRKLEYK
101: GLRLLSIAIL DMLNATLVSA AANAAVFVAE LGKNGNKHAK WNKVCDRFTT YCDHGAGAII AAFAGVILML LVSAVSISRL LINSKNFSTT ATTTSVV
101: GLRLLSIAIL DMLNATLVSA AANAAVFVAE LGKNGNKHAK WNKVCDRFTT YCDHGAGAII AAFAGVILML LVSAVSISRL LINSKNFSTT ATTTSVV
Arabidopsis Description
CASP-like protein 1B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUP0]
SUBAcon: [extracellular,vacuole,plasma membrane,mitochondrion]
SUBAcon: [extracellular,vacuole,plasma membrane,mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.