Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 2
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G44550.1 | KRH22653 | AT5G22290.1 | 21798944 |
| AT5G44550.1 | KRH26664 | AT5G22290.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH12746 | Soybean | cytosol, plasma membrane, vacuole | 89.42 | 84.08 |
| KRH43078 | Soybean | peroxisome, plasma membrane, plastid, vacuole | 71.43 | 69.59 |
| KRH59207 | Soybean | extracellular, plasma membrane, vacuole | 70.9 | 57.51 |
| Solyc02g069730.2.1 | Tomato | plasma membrane | 55.03 | 53.33 |
| PGSC0003DMT400054615 | Potato | plasma membrane | 55.56 | 52.76 |
| Bra033751.1-P | Field mustard | plasma membrane | 53.44 | 52.6 |
| VIT_10s0092g00220.t01 | Wine grape | cytosol, plasma membrane, vacuole | 55.56 | 51.47 |
| AT5G44550.1 | Thale cress | plasma membrane | 53.44 | 51.27 |
| CDY49491 | Canola | plasma membrane | 53.97 | 51.26 |
| CDY49020 | Canola | plasma membrane | 53.97 | 51.26 |
| CDY63706 | Canola | endoplasmic reticulum, plasma membrane, plastid | 52.38 | 50.0 |
| CDY14930 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 52.38 | 50.0 |
| Bra039516.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 52.38 | 50.0 |
| CDX76458 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 51.32 | 48.74 |
| AT4G20390.1 | Thale cress | extracellular, mitochondrion, plasma membrane, vacuole | 50.79 | 48.73 |
| CDY31439 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 48.68 | 46.23 |
| GSMUA_Achr7P08030_001 | Banana | plasma membrane | 47.09 | 43.84 |
| TraesCS5D01G059600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 40.74 | 39.29 |
| TraesCS5A01G049000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 40.74 | 39.29 |
| TraesCS5B01G054100.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 40.21 | 38.78 |
| Os12t0610800-01 | Rice | plasma membrane | 39.68 | 38.46 |
| EES17365 | Sorghum | plastid | 42.86 | 38.39 |
| Zm00001d031047_P001 | Maize | cytosol, peroxisome, plasma membrane, plastid | 38.1 | 35.12 |
| KRH25574 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 26.98 | 31.29 |
| KRH50920 | Soybean | cytosol, plasma membrane, vacuole | 30.69 | 30.85 |
| KRH55963 | Soybean | extracellular | 26.45 | 30.67 |
| KRH50041 | Soybean | plasma membrane | 25.93 | 30.62 |
| KRH02204 | Soybean | cytosol, plasma membrane, vacuole | 30.16 | 30.48 |
| KRH06871 | Soybean | endoplasmic reticulum, plasma membrane | 24.34 | 28.57 |
| KRH11251 | Soybean | plasma membrane | 30.16 | 28.22 |
| KRG96380 | Soybean | plasma membrane | 26.45 | 25.51 |
| KRH17069 | Soybean | extracellular, plasma membrane, vacuole | 22.22 | 25.15 |
| KRH68112 | Soybean | plasma membrane | 25.4 | 24.87 |
| KRG94650 | Soybean | plasma membrane | 25.4 | 24.37 |
| KRH02202 | Soybean | golgi, plasma membrane, vacuole | 23.28 | 22.8 |
| KRH72716 | Soybean | extracellular | 16.93 | 22.7 |
| KRH21024 | Soybean | cytosol, plasma membrane, vacuole | 22.22 | 22.22 |
| KRH50921 | Soybean | plasma membrane | 21.16 | 20.73 |
Protein Annotations
| MapMan:35.1 | UniProt:A0A0R0IBR9 | EMBL:ACUP02005492 | InterPro:CASP/CASPL | InterPro:CASP_dom | EnsemblPlantsGene:GLYMA_09G083400 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0051536 | EnsemblPlants:KRH37705 | ProteinID:KRH37705 | ProteinID:KRH37705.1 | PFAM:PF04535 |
| PANTHER:PTHR11615 | PANTHER:PTHR11615:SF120 | TIGRFAMs:TIGR01569 | TMHMM:TMhelix | UniParc:UPI0006ED643E | SEG:seg |
Description
hypothetical protein
Coordinates
chr9:-:9979578..9982609
Molecular Weight (calculated)
20423.3 Da
IEP (calculated)
9.791
GRAVY (calculated)
0.451
Length
189 amino acids
Sequence
(BLAST)
(BLAST)
001: MASENGGEKP KKDWVLLSLR VVAFLATASA TLVMAFNKQT KSFVVATVGS TPITATFAAK FNQTPAFVFF VIANGNAALH NNLVMIAMEI LGTRYDYKGP
101: RLALIAILDM MTMALASDGD GAATFMSELG KNGNSHAKWD KICDKFETYC DRGVVALIVS FVGFILLLII SVMSIIKLLK PNRINHASP
101: RLALIAILDM MTMALASDGD GAATFMSELG KNGNSHAKWD KICDKFETYC DRGVVALIVS FVGFILLLII SVMSIIKLLK PNRINHASP
001: MAVSKLTLAA TSGKSCKILL GLRLLAFSAT LSAAIVMGLN KETKTFIVGK VGNTPIQATF TAKFDHTPAF VFFVVANAMV SFHNLLMIAL QIFGGKMEFT
101: GFRLLSVAIL DMLNVTLISA AANAAAFMAE VGKNGNKHAR WDKICDRFAT YCDHGAGALI AAFAGVILML IISAASISRL VQPNKCCSTT ASPSVVP
101: GFRLLSVAIL DMLNVTLISA AANAAAFMAE VGKNGNKHAR WDKICDRFAT YCDHGAGALI AAFAGVILML IISAASISRL VQPNKCCSTT ASPSVVP
Arabidopsis Description
CASP-like protein 1B1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FI10]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.