Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 3
- plasma membrane 4
- endoplasmic reticulum 2
- vacuole 3
- golgi 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G44550.1 | KRH22653 | AT5G22290.1 | 21798944 |
| AT5G44550.1 | KRH26664 | AT5G22290.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH43078 | Soybean | peroxisome, plasma membrane, plastid, vacuole | 78.97 | 94.85 |
| KRH37705 | Soybean | extracellular, plasma membrane, plastid, vacuole | 57.51 | 70.9 |
| KRH12746 | Soybean | cytosol, plasma membrane, vacuole | 60.09 | 69.65 |
| Solyc02g069730.2.1 | Tomato | plasma membrane | 43.78 | 52.31 |
| VIT_10s0092g00220.t01 | Wine grape | cytosol, plasma membrane, vacuole | 44.64 | 50.98 |
| PGSC0003DMT400054615 | Potato | plasma membrane | 42.92 | 50.25 |
| AT4G20390.1 | Thale cress | extracellular, mitochondrion, plasma membrane, vacuole | 41.2 | 48.73 |
| Bra033751.1-P | Field mustard | plasma membrane | 39.06 | 47.4 |
| CDX76458 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 40.34 | 47.24 |
| GSMUA_Achr7P08030_001 | Banana | plasma membrane | 40.77 | 46.8 |
| CDY31439 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 39.48 | 46.23 |
| CDY49491 | Canola | plasma membrane | 39.06 | 45.73 |
| CDY49020 | Canola | plasma membrane | 39.06 | 45.73 |
| AT5G44550.1 | Thale cress | plasma membrane | 38.63 | 45.69 |
| CDY63706 | Canola | endoplasmic reticulum, plasma membrane, plastid | 38.63 | 45.45 |
| CDY14930 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 38.63 | 45.45 |
| Bra039516.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 38.63 | 45.45 |
| Os12t0610800-01 | Rice | plasma membrane | 35.62 | 42.56 |
| TraesCS5B01G054100.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 34.33 | 40.82 |
| TraesCS5A01G049000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 34.33 | 40.82 |
| TraesCS5D01G059600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 33.91 | 40.31 |
| Zm00001d031047_P001 | Maize | cytosol, peroxisome, plasma membrane, plastid | 35.19 | 40.0 |
| EES17365 | Sorghum | plastid | 35.19 | 38.86 |
| KRH50041 | Soybean | plasma membrane | 22.32 | 32.5 |
| KRH02204 | Soybean | cytosol, plasma membrane, vacuole | 25.32 | 31.55 |
| KRH50920 | Soybean | cytosol, plasma membrane, vacuole | 25.32 | 31.38 |
| KRH25574 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 21.89 | 31.29 |
| KRH55963 | Soybean | extracellular | 21.03 | 30.06 |
| KRG96380 | Soybean | plasma membrane | 23.18 | 27.55 |
| KRH11251 | Soybean | plasma membrane | 23.61 | 27.23 |
| KRH68112 | Soybean | plasma membrane | 22.32 | 26.94 |
| KRH06871 | Soybean | endoplasmic reticulum, plasma membrane | 18.03 | 26.09 |
| KRH17069 | Soybean | extracellular, plasma membrane, vacuole | 18.45 | 25.75 |
| KRH72716 | Soybean | extracellular | 15.45 | 25.53 |
| KRH02202 | Soybean | golgi, plasma membrane, vacuole | 19.31 | 23.32 |
| KRG94650 | Soybean | plasma membrane | 19.31 | 22.84 |
| KRH50921 | Soybean | plasma membrane | 17.6 | 21.24 |
| KRH21024 | Soybean | cytosol, plasma membrane, vacuole | 17.17 | 21.16 |
Protein Annotations
| EMBL:ACUP02003304 | EnsemblPlants:KRH59207 | EnsemblPlantsGene:GLYMA_05G170900 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0051536 | InterPro:CASP/CASPL |
| InterPro:CASP_dom | PANTHER:PTHR11615 | PANTHER:PTHR11615:SF120 | PFAM:PF04535 | ProteinID:KRH59207 | ProteinID:KRH59207.1 |
| TIGRFAMs:TIGR01569 | TMHMM:TMhelix | UniParc:UPI0002969EBD | UniProt:K7KQR2 | MapMan:35.1 | : |
Description
hypothetical protein
Coordinates
chr5:-:36129790..36131867
Molecular Weight (calculated)
25541.6 Da
IEP (calculated)
9.579
GRAVY (calculated)
0.555
Length
233 amino acids
Sequence
(BLAST)
(BLAST)
001: MIWLINFALS YINPSFSLGH LHYLRPFSHY GNQLANTWTM ASENGDKLEL AFSAVPDPKP KKDWVILSLR VVAFFATASA TLVMAFNKQT KGMVVATIGT
101: NPVTITLTAM FQHTPAFIFF VIVNAIASFY NLLVIGVEIL GPQYDYKGLR LGLIAILDVM TMALAATGDG AATFMAELGR NGNSHARWDK ICDKFEAYCN
201: RGGVALVASF VGLILLLVVT VMSITKLLKL NRI
101: NPVTITLTAM FQHTPAFIFF VIVNAIASFY NLLVIGVEIL GPQYDYKGLR LGLIAILDVM TMALAATGDG AATFMAELGR NGNSHARWDK ICDKFEAYCN
201: RGGVALVASF VGLILLLVVT VMSITKLLKL NRI
001: MAREKIVVAG GTTKSWKLLL GLRIFAFMAT LAAAIVMSLN KETKTLVVAT IGTVPIKATL TAKFQHTPAF VFFVIANVMV SFHNLLMIVV QIFSRKLEYK
101: GLRLLSIAIL DMLNATLVSA AANAAVFVAE LGKNGNKHAK WNKVCDRFTT YCDHGAGAII AAFAGVILML LVSAVSISRL LINSKNFSTT ATTTSVV
101: GLRLLSIAIL DMLNATLVSA AANAAVFVAE LGKNGNKHAK WNKVCDRFTT YCDHGAGAII AAFAGVILML LVSAVSISRL LINSKNFSTT ATTTSVV
Arabidopsis Description
CASP-like protein 1B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUP0]
SUBAcon: [mitochondrion,plasma membrane,extracellular,vacuole]
SUBAcon: [mitochondrion,plasma membrane,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.