Factsheet for Zm00001d031047_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plasma membrane, peroxisome, plastid

Predictor Summary:

plastid 1
cytosol 1
extracellular 1
golgi 1
plasma membrane 2
endoplasmic reticulum 1
vacuole 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane, plastid
Any Predictor:	cytosol, peroxisome, plastid, secretory
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES17365	Sorghum	plastid	78.05	75.83
TraesCS5D01G059600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	63.9	66.84
TraesCS5A01G049000.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	63.9	66.84
TraesCS5B01G054100.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	62.93	65.82
Os12t0610800-01	Rice	plasma membrane	58.54	61.54
GSMUA_Achr7P08030_001	Banana	plasma membrane	49.76	50.25
KRH43078	Soybean	peroxisome, plasma membrane, plastid, vacuole	39.51	41.75
Bra033751.1-P	Field mustard	plasma membrane	36.1	38.54
CDY49491	Canola	plasma membrane	37.07	38.19
CDX76458	Canola	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	37.07	38.19
KRH37705	Soybean	extracellular, plasma membrane, plastid, vacuole	35.12	38.1
CDY31439	Canola	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	36.59	37.69
AT4G20390.1	Thale cress	extracellular, mitochondrion, plasma membrane, vacuole	36.1	37.56
Solyc02g069730.2.1	Tomato	plasma membrane	35.61	37.44
CDY49020	Canola	plasma membrane	36.1	37.19
PGSC0003DMT400054615	Potato	plasma membrane	35.61	36.68
AT5G44550.1	Thale cress	plasma membrane	35.12	36.55
CDY63706	Canola	endoplasmic reticulum, plasma membrane, plastid	34.63	35.86
CDY14930	Canola	endoplasmic reticulum, plasma membrane, vacuole	34.63	35.86
Bra039516.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	34.63	35.86
KRH12746	Soybean	cytosol, plasma membrane, vacuole	35.12	35.82
VIT_10s0092g00220.t01	Wine grape	cytosol, plasma membrane, vacuole	35.61	35.78
KRH59207	Soybean	extracellular, plasma membrane, vacuole	40.0	35.19
Zm00001d010038_P001	Maize	plasma membrane	26.83	33.74
Zm00001d040807_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane, plastid	27.32	25.45
Zm00001d019457_P001	Maize	endoplasmic reticulum, plasma membrane, plastid, vacuole	20.0	20.92
Zm00001d005158_P001	Maize	extracellular	19.51	19.7

Protein Annotations

EntrezGene:103640594	MapMan:35.1	UniProt:A0A1D6KG40	InterPro:CASP/CASPL	InterPro:CASP_dom	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0016020	GO:GO:0016021	ProteinID:ONM02054.1	PFAM:PF04535
PFscan:PS51257	PANTHER:PTHR11615	PANTHER:PTHR11615:SF120	TIGRFAMs:TIGR01569	TMHMM:TMhelix	UniParc:UPI000221EB0E
EnsemblPlantsGene:Zm00001d031047	EnsemblPlants:Zm00001d031047_P001	EnsemblPlants:Zm00001d031047_T001	SEG:seg	:	:

Description

CASP-like protein 2

Coordinates

chr1:-:174833825..174835336

Molecular Weight (calculated)

21173.0 Da

IEP (calculated)

11.530

GRAVY (calculated)

0.441

Length

205 amino acids

Sequence
(BLAST)

001: MDLERGDKKP PPPAPRTAAT TTTTTTTSAC SGKKRPPLRD SLVALQPVLL RAAAALAAAA AAAVMALDAQ SYTAVVAIVG TRPLTQTFTA RFSDTPAFVY
101: FVIANAIAAA YNLLVLLVRR RRTTASLVVR MLDMVVMALL ATGAAAAASM AELGRNGNAR ARWNPMCDRF GSFCRRGGAA LASSFVGVAL MLALNLLSAA
201: SGAGC

Best Arabidopsis Sequence Match ( AT5G44550.1 )
(BLAST)

001: MAVSKLTLAA TSGKSCKILL GLRLLAFSAT LSAAIVMGLN KETKTFIVGK VGNTPIQATF TAKFDHTPAF VFFVVANAMV SFHNLLMIAL QIFGGKMEFT
101: GFRLLSVAIL DMLNVTLISA AANAAAFMAE VGKNGNKHAR WDKICDRFAT YCDHGAGALI AAFAGVILML IISAASISRL VQPNKCCSTT ASPSVVP

Arabidopsis Description

CASP-like protein 1B1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FI10]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.