Factsheet for Zm00001d005158_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 4
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d019457_P001	Maize	endoplasmic reticulum, plasma membrane, plastid, vacuole	80.79	83.67
EER98393	Sorghum	endoplasmic reticulum, plasma membrane, plastid, vacuole	79.31	80.1
TraesCS1A01G248700.1	Wheat	endoplasmic reticulum, plasma membrane, plastid, vacuole	63.05	67.72
TraesCS1D01G248200.1	Wheat	endoplasmic reticulum, plasma membrane, plastid, vacuole	61.58	66.14
Os07t0442900-01	Rice	plasma membrane	64.53	63.28
TraesCS1B01G259400.1	Wheat	plasma membrane	58.13	62.43
HORVU1Hr1G062380.3	Barley	plastid	62.56	58.53
GSMUA_Achr5P00430_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	49.75	52.88
GSMUA_Achr9P30950_001	Banana	plasma membrane	52.22	51.21
KRH50921	Soybean	plasma membrane	39.9	41.97
AT4G15610.1	Thale cress	plasma membrane	39.41	41.45
KRH21024	Soybean	cytosol, plasma membrane, vacuole	37.93	40.74
KRH02202	Soybean	golgi, plasma membrane, vacuole	38.42	40.41
CDY09750	Canola	plasma membrane	38.42	40.41
CDX90580	Canola	plasma membrane	37.93	39.9
Bra012777.1-P	Field mustard	plasma membrane	37.93	39.9
AT3G06390.1	Thale cress	plasma membrane	38.92	39.7
VIT_05s0020g01830.t01	Wine grape	cytosol	40.39	39.42
PGSC0003DMT400058342	Potato	cytosol	37.93	39.09
Solyc01g067300.2.1	Tomato	cytosol	36.45	37.76
CDY24696	Canola	endoplasmic reticulum, plasma membrane, vacuole	37.93	37.56
CDY05260	Canola	plasma membrane	37.93	37.56
CDX76993	Canola	plasma membrane	37.93	37.56
Bra020752.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	37.93	37.56
Zm00001d040807_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane, plastid	26.6	24.55
Zm00001d010038_P001	Maize	plasma membrane	19.21	23.93
Zm00001d031047_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	19.7	19.51

Protein Annotations

EnsemblPlants:Zm00001d005158_P001	EnsemblPlants:Zm00001d005158_T001	EnsemblPlantsGene:Zm00001d005158	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0016020	GO:GO:0016021	InterPro:CASP/CASPL	InterPro:CASP_dom	PANTHER:PTHR11615	PANTHER:PTHR11615:SF150
PFAM:PF04535	ProteinID:ONM20482.1	SEG:seg	TIGRFAMs:TIGR01569	TMHMM:TMhelix	UniParc:UPI00022075BE
UniProt:A0A1D6EKR6	MapMan:35.1	:	:	:	:

Description

CASP-like protein 3

Coordinates

chr2:-:161666601..161668813

Molecular Weight (calculated)

21176.2 Da

IEP (calculated)

10.461

GRAVY (calculated)

0.738

Length

203 amino acids

Sequence
(BLAST)

001: MATVNATTTT AGSGKQTDAA PSPPAAAAAA CRSLSGADLA LRVLLFAVTL SGLVVLATAK QTVRVPVPQI PGLVLSLPAK FKDSPALIYL LVALCVTCFY
101: SLLSTAFTSL KLLSGSSPSR TLFLLVLFDV FYAAIMASAT GSAGGVAWIG LKGNSHTNWN KICNIYSKFC RHIGSSVFLG LIASVVLVLL TILNAHSLYR
201: RSR

Best Arabidopsis Sequence Match ( AT4G15610.1 )
(BLAST)

001: MGYETKSTLD TERSTAPGTG TTTKSCSMTQ VVLRFVLFAA TLTSIVVMVT SKQTKNIFLP GTPIRIPAAE FTNSPALIYF VVALSVACFY SIVSTFVTVS
101: AFKKHSCSAV LLLNLAIMDA VMVGIVASAT GAGGGVAYLG LKGNKEVRWG KICHIYDKFC RHVGGAIAVS LFASVVLLLL SIISVLSLYK KIR

Arabidopsis Description

CASP-like protein 1D1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE29]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.