Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- golgi 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra012777.1-P | Field mustard | plasma membrane | 75.13 | 75.13 |
CDX90580 | Canola | plasma membrane | 75.13 | 75.13 |
CDY09750 | Canola | plasma membrane | 75.13 | 75.13 |
KRH50921 | Soybean | plasma membrane | 47.15 | 47.15 |
KRH02202 | Soybean | golgi, plasma membrane, vacuole | 47.15 | 47.15 |
AT3G06390.1 | Thale cress | plasma membrane | 48.19 | 46.73 |
Solyc01g067300.2.1 | Tomato | cytosol | 47.15 | 46.43 |
VIT_05s0020g01830.t01 | Wine grape | cytosol | 48.7 | 45.19 |
PGSC0003DMT400058342 | Potato | cytosol | 46.11 | 45.18 |
GSMUA_Achr5P00430_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 43.01 | 43.46 |
GSMUA_Achr9P30950_001 | Banana | plasma membrane | 46.11 | 43.0 |
TraesCS1D01G248200.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid, vacuole | 40.41 | 41.27 |
KRH21024 | Soybean | cytosol, plasma membrane, vacuole | 39.9 | 40.74 |
TraesCS1A01G248700.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid, vacuole | 39.38 | 40.21 |
Zm00001d005158_P001 | Maize | extracellular | 41.45 | 39.41 |
Zm00001d019457_P001 | Maize | endoplasmic reticulum, plasma membrane, plastid, vacuole | 39.38 | 38.78 |
TraesCS1B01G259400.1 | Wheat | plasma membrane | 37.31 | 38.1 |
EER98393 | Sorghum | endoplasmic reticulum, plasma membrane, plastid, vacuole | 38.86 | 37.31 |
Os07t0442900-01 | Rice | plasma membrane | 38.86 | 36.23 |
HORVU1Hr1G062380.3 | Barley | plastid | 38.86 | 34.56 |
AT4G03540.1 | Thale cress | extracellular, plasma membrane, vacuole | 25.91 | 30.49 |
AT1G03700.1 | Thale cress | plasma membrane | 23.83 | 28.05 |
AT4G15630.1 | Thale cress | plasma membrane | 27.46 | 27.89 |
AT4G20390.1 | Thale cress | extracellular, mitochondrion, plasma membrane, vacuole | 26.94 | 26.4 |
AT4G15620.1 | Thale cress | plasma membrane | 24.87 | 25.26 |
AT5G44550.1 | Thale cress | plasma membrane | 25.39 | 24.87 |
AT4G25040.1 | Thale cress | extracellular, plasma membrane, vacuole | 20.21 | 22.94 |
Protein Annotations
MapMan:35.1 | EntrezGene:827238 | ProteinID:AEE83628.1 | EMBL:AF324722 | EMBL:AF326884 | EMBL:AK226478 |
ArrayExpress:AT4G15610 | EnsemblPlantsGene:AT4G15610 | RefSeq:AT4G15610 | TAIR:AT4G15610 | RefSeq:AT4G15610-TAIR-G | EnsemblPlants:AT4G15610.1 |
TAIR:AT4G15610.1 | EMBL:AY086594 | EMBL:AY113938 | ProteinID:CAB10339.1 | ProteinID:CAB78603.1 | InterPro:CASP/CASPL |
InterPro:CASP_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
GO:GO:0005737 | GO:GO:0005768 | GO:GO:0005794 | GO:GO:0005802 | GO:GO:0005886 | GO:GO:0016020 |
GO:GO:0016021 | GO:GO:0051536 | RefSeq:NP_567472.1 | PFAM:PF04535 | PO:PO:0000293 | PO:PO:0001185 |
PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 |
PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009047 | PO:PO:0020030 |
PO:PO:0020100 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR11615 | PANTHER:PTHR11615:SF150 | UniProt:Q9FE29 |
TIGRFAMs:TIGR01569 | TMHMM:TMhelix | UniParc:UPI00000A6933 | SEG:seg | : | : |
Description
CASP-like protein 1D1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE29]
Coordinates
chr4:+:8908763..8910945
Molecular Weight (calculated)
20525.6 Da
IEP (calculated)
10.117
GRAVY (calculated)
0.730
Length
193 amino acids
Sequence
(BLAST)
(BLAST)
001: MGYETKSTLD TERSTAPGTG TTTKSCSMTQ VVLRFVLFAA TLTSIVVMVT SKQTKNIFLP GTPIRIPAAE FTNSPALIYF VVALSVACFY SIVSTFVTVS
101: AFKKHSCSAV LLLNLAIMDA VMVGIVASAT GAGGGVAYLG LKGNKEVRWG KICHIYDKFC RHVGGAIAVS LFASVVLLLL SIISVLSLYK KIR
101: AFKKHSCSAV LLLNLAIMDA VMVGIVASAT GAGGGVAYLG LKGNKEVRWG KICHIYDKFC RHVGGAIAVS LFASVVLLLL SIISVLSLYK KIR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.