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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra012777.1-P Field mustard plasma membrane 75.13 75.13
CDX90580 Canola plasma membrane 75.13 75.13
CDY09750 Canola plasma membrane 75.13 75.13
KRH50921 Soybean plasma membrane 47.15 47.15
KRH02202 Soybean golgi, plasma membrane, vacuole 47.15 47.15
AT3G06390.1 Thale cress plasma membrane 48.19 46.73
Solyc01g067300.2.1 Tomato cytosol 47.15 46.43
VIT_05s0020g01830.t01 Wine grape cytosol 48.7 45.19
PGSC0003DMT400058342 Potato cytosol 46.11 45.18
GSMUA_Achr5P00430_001 Banana endoplasmic reticulum, plasma membrane, vacuole 43.01 43.46
GSMUA_Achr9P30950_001 Banana plasma membrane 46.11 43.0
TraesCS1D01G248200.1 Wheat endoplasmic reticulum, plasma membrane, plastid, vacuole 40.41 41.27
KRH21024 Soybean cytosol, plasma membrane, vacuole 39.9 40.74
TraesCS1A01G248700.1 Wheat endoplasmic reticulum, plasma membrane, plastid, vacuole 39.38 40.21
Zm00001d005158_P001 Maize extracellular 41.45 39.41
Zm00001d019457_P001 Maize endoplasmic reticulum, plasma membrane, plastid, vacuole 39.38 38.78
TraesCS1B01G259400.1 Wheat plasma membrane 37.31 38.1
EER98393 Sorghum endoplasmic reticulum, plasma membrane, plastid, vacuole 38.86 37.31
Os07t0442900-01 Rice plasma membrane 38.86 36.23
HORVU1Hr1G062380.3 Barley plastid 38.86 34.56
AT4G03540.1 Thale cress extracellular, plasma membrane, vacuole 25.91 30.49
AT1G03700.1 Thale cress plasma membrane 23.83 28.05
AT4G15630.1 Thale cress plasma membrane 27.46 27.89
AT4G20390.1 Thale cress extracellular, mitochondrion, plasma membrane, vacuole 26.94 26.4
AT4G15620.1 Thale cress plasma membrane 24.87 25.26
AT5G44550.1 Thale cress plasma membrane 25.39 24.87
AT4G25040.1 Thale cress extracellular, plasma membrane, vacuole 20.21 22.94
Protein Annotations
MapMan:35.1EntrezGene:827238ProteinID:AEE83628.1EMBL:AF324722EMBL:AF326884EMBL:AK226478
ArrayExpress:AT4G15610EnsemblPlantsGene:AT4G15610RefSeq:AT4G15610TAIR:AT4G15610RefSeq:AT4G15610-TAIR-GEnsemblPlants:AT4G15610.1
TAIR:AT4G15610.1EMBL:AY086594EMBL:AY113938ProteinID:CAB10339.1ProteinID:CAB78603.1InterPro:CASP/CASPL
InterPro:CASP_domGO:GO:0003674GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005768GO:GO:0005794GO:GO:0005802GO:GO:0005886GO:GO:0016020
GO:GO:0016021GO:GO:0051536RefSeq:NP_567472.1PFAM:PF04535PO:PO:0000293PO:PO:0001185
PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0009005PO:PO:0009009
PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009047PO:PO:0020030
PO:PO:0020100PO:PO:0025022PO:PO:0025281PANTHER:PTHR11615PANTHER:PTHR11615:SF150UniProt:Q9FE29
TIGRFAMs:TIGR01569TMHMM:TMhelixUniParc:UPI00000A6933SEG:seg::
Description
CASP-like protein 1D1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE29]
Coordinates
chr4:+:8908763..8910945
Molecular Weight (calculated)
20525.6 Da
IEP (calculated)
10.117
GRAVY (calculated)
0.730
Length
193 amino acids
Sequence
(BLAST)
001: MGYETKSTLD TERSTAPGTG TTTKSCSMTQ VVLRFVLFAA TLTSIVVMVT SKQTKNIFLP GTPIRIPAAE FTNSPALIYF VVALSVACFY SIVSTFVTVS
101: AFKKHSCSAV LLLNLAIMDA VMVGIVASAT GAGGGVAYLG LKGNKEVRWG KICHIYDKFC RHVGGAIAVS LFASVVLLLL SIISVLSLYK KIR
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.