Factsheet for Bra012777.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
plasma membrane 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90580	Canola	plasma membrane	100.0	100.0
AT4G15610.1	Thale cress	plasma membrane	75.13	75.13
GSMUA_Achr5P00430_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	48.19	48.69
KRH02202	Soybean	golgi, plasma membrane, vacuole	47.15	47.15
KRH50921	Soybean	plasma membrane	46.63	46.63
Solyc01g067300.2.1	Tomato	cytosol	47.15	46.43
GSMUA_Achr9P30950_001	Banana	plasma membrane	49.74	46.38
PGSC0003DMT400058342	Potato	cytosol	47.15	46.19
VIT_05s0020g01830.t01	Wine grape	cytosol	49.74	46.15
Zm00001d019457_P001	Maize	endoplasmic reticulum, plasma membrane, plastid, vacuole	41.97	41.33
Bra020752.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	43.52	40.98
KRH21024	Soybean	cytosol, plasma membrane, vacuole	39.9	40.74
TraesCS1A01G248700.1	Wheat	endoplasmic reticulum, plasma membrane, plastid, vacuole	38.34	39.15
TraesCS1D01G248200.1	Wheat	endoplasmic reticulum, plasma membrane, plastid, vacuole	38.34	39.15
EER98393	Sorghum	endoplasmic reticulum, plasma membrane, plastid, vacuole	40.41	38.81
TraesCS1B01G259400.1	Wheat	plasma membrane	37.31	38.1
Zm00001d005158_P001	Maize	extracellular	39.9	37.93
Os07t0442900-01	Rice	plasma membrane	37.31	34.78
HORVU1Hr1G062380.3	Barley	plastid	38.86	34.56
Bra034215.1-P	Field mustard	extracellular, plasma membrane	27.98	32.93
Bra033751.1-P	Field mustard	plasma membrane	29.02	29.17
Bra012775.1-P	Field mustard	plasma membrane	28.5	28.95
Bra039516.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	28.5	27.78
Bra015256.1-P	Field mustard	extracellular, plasma membrane, vacuole	24.87	27.43
Bra038078.1-P	Field mustard	plasma membrane	25.91	25.91
Bra010476.1-P	Field mustard	extracellular, plasma membrane	21.76	25.0
Bra013858.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	20.21	23.08
Bra019194.1-P	Field mustard	extracellular, plasma membrane, vacuole	19.17	21.76

Protein Annotations

MapMan:35.1	EnsemblPlantsGene:Bra012777	EnsemblPlants:Bra012777.1	EnsemblPlants:Bra012777.1-P	InterPro:CASP/CASPL	InterPro:CASP_dom
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0005794
GO:GO:0005802	GO:GO:0005886	GO:GO:0016020	GO:GO:0016021	UniProt:M4D8G7	PFAM:PF04535
PANTHER:PTHR11615	PANTHER:PTHR11615:SF150	TIGRFAMs:TIGR01569	TMHMM:TMhelix	UniParc:UPI0002540832	SEG:seg

Description

AT4G15610 (E=3e-052) | integral membrane family protein

Coordinates

chrA03:+:22324780..22326334

Molecular Weight (calculated)

20679.8 Da

IEP (calculated)

9.898

GRAVY (calculated)

0.741

Length

193 amino acids

Sequence
(BLAST)

001: MGSDETKSTI DTEKTTVPGG SCTTSKSCWM VQVVLRLFLF AATLTSIVVM VTSKQSKTIP IFPFHTQAKF THSPAFIYFV VALSVACFYS IISTLATLSA
101: FKKPSSCSAI LLLNLAIMDA VMVGIVASAT GASGGVAYIG LKGNKNVRWR KICDLYDTFC HHVGGAIAVS LVASIILLLL SIISVLSLYK RIR

Best Arabidopsis Sequence Match ( AT4G15610.1 )
(BLAST)

001: MGYETKSTLD TERSTAPGTG TTTKSCSMTQ VVLRFVLFAA TLTSIVVMVT SKQTKNIFLP GTPIRIPAAE FTNSPALIYF VVALSVACFY SIVSTFVTVS
101: AFKKHSCSAV LLLNLAIMDA VMVGIVASAT GAGGGVAYLG LKGNKEVRWG KICHIYDKFC RHVGGAIAVS LFASVVLLLL SIISVLSLYK KIR

Arabidopsis Description

CASP-like protein 1D1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE29]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.