Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012775.1-P | Field mustard | plasma membrane | 99.47 | 99.47 |
| CDY09749 | Canola | plasma membrane | 97.37 | 97.37 |
| CDY22743 | Canola | plasma membrane | 86.84 | 86.84 |
| AT4G15630.1 | Thale cress | plasma membrane | 86.32 | 86.32 |
| CDY09075 | Canola | plasma membrane | 84.74 | 84.74 |
| AT4G15620.1 | Thale cress | plasma membrane | 83.16 | 83.16 |
| VIT_05s0020g01820.t01 | Wine grape | cytosol, plasma membrane, vacuole | 51.58 | 50.26 |
| KRH02204 | Soybean | cytosol, plasma membrane, vacuole | 45.79 | 46.52 |
| KRH50920 | Soybean | cytosol, plasma membrane, vacuole | 45.79 | 46.28 |
| PGSC0003DMT400058378 | Potato | plasma membrane | 46.84 | 45.88 |
| Solyc01g067330.2.1 | Tomato | plasma membrane | 45.79 | 45.79 |
| GSMUA_Achr3P23880_001 | Banana | golgi, plasma membrane, vacuole | 47.37 | 45.69 |
| VIT_07s0104g01350.t01 | Wine grape | cytosol | 46.84 | 44.06 |
| KRH11251 | Soybean | plasma membrane | 46.32 | 43.56 |
| Solyc09g074550.2.1 | Tomato | extracellular | 33.68 | 39.75 |
| KRH68112 | Soybean | plasma membrane | 38.42 | 37.82 |
| PGSC0003DMT400029522 | Potato | plasma membrane | 39.47 | 37.31 |
| KRG96380 | Soybean | plasma membrane | 38.42 | 37.24 |
| TraesCS7B01G287500.1 | Wheat | plastid | 36.84 | 35.35 |
| TraesCS7D01G381200.1 | Wheat | plastid | 37.37 | 35.32 |
| TraesCS7A01G384700.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid | 36.84 | 34.65 |
| GSMUA_Achr9P30940_001 | Banana | endoplasmic reticulum, plasma membrane | 34.21 | 34.57 |
| HORVU7Hr1G091440.2 | Barley | plastid | 36.32 | 34.5 |
| Zm00001d040807_P001 | Maize | cytosol, endoplasmic reticulum, plasma membrane, plastid | 37.89 | 32.73 |
| EES02949 | Sorghum | plastid | 37.89 | 32.43 |
| Os01t0363300-01 | Rice | golgi, plasma membrane, plastid | 36.32 | 32.09 |
| GSMUA_Achr1P14720_001 | Banana | vacuole | 28.95 | 28.5 |
| CDX90580 | Canola | plasma membrane | 28.95 | 28.5 |
| GSMUA_Achr5P00440_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 30.0 | 28.36 |
| CDY09750 | Canola | plasma membrane | 28.42 | 27.98 |
| CDY48566 | Canola | extracellular, plasma membrane | 23.68 | 27.44 |
| CDX89875 | Canola | extracellular, plasma membrane, vacuole | 23.16 | 26.83 |
| CDY21972 | Canola | extracellular, plasma membrane | 23.16 | 26.83 |
| CDY18177 | Canola | extracellular, plasma membrane, vacuole | 23.16 | 26.83 |
| CDY70062 | Canola | extracellular | 16.32 | 25.83 |
| CDY49020 | Canola | plasma membrane | 26.84 | 25.63 |
| CDY63706 | Canola | endoplasmic reticulum, plasma membrane, plastid | 26.32 | 25.25 |
| CDY49491 | Canola | plasma membrane | 26.32 | 25.13 |
| CDY14930 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 25.79 | 24.75 |
| CDX76458 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 25.79 | 24.62 |
| CDY05260 | Canola | plasma membrane | 26.32 | 24.39 |
| CDX76993 | Canola | plasma membrane | 26.32 | 24.39 |
| CDY31439 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 25.26 | 24.12 |
| CDY24696 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 25.79 | 23.9 |
| CDX92668 | Canola | extracellular, plasma membrane, vacuole | 19.47 | 21.76 |
| CDY11050 | Canola | cytosol | 15.79 | 21.74 |
| CDY03385 | Canola | plasma membrane | 18.95 | 21.3 |
| CDY08965 | Canola | extracellular, plasma membrane, vacuole | 12.63 | 20.34 |
| CDY34336 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 17.89 | 20.12 |
Protein Annotations
| EnsemblPlants:CDX90578 | EnsemblPlantsGene:GSBRNA2T00151212001 | GO:A0A078DTT5 | InterPro:CASP/CASPL | InterPro:CASP_dom | PANTHER:PTHR11615 |
| PANTHER:PTHR11615:SF150 | PFAM:PF04535 | ProteinID:CDX90578 | ProteinID:CDX90578.1 | TIGRFAMs:TIGR01569 | TMHMM:TMhelix |
| UniParc:UPI0004EDC09D | MapMan:35.1 | : | : | : | : |
Description
BnaA03g42030D
Coordinates
chrLK031863:-:923893..926018
Molecular Weight (calculated)
20078.6 Da
IEP (calculated)
10.483
GRAVY (calculated)
0.626
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQERKNNMN GMEMEKGKRD SGSRKGLELT MRVLALVLTM VAATVLGVAK QTKVVSIKLI PTLPPLDVST TAKASYLSAF VYNISANAIA CGYAAISIAV
101: LMICKGRRSK GLLMAVLIGD LVMVGLLFSG TGAAGAIGLM GSQGNKHVMW KKVCNVFGKF CHQAAASVAI TLIASIVFML LVVLDAMKLP
101: LMICKGRRSK GLLMAVLIGD LVMVGLLFSG TGAAGAIGLM GSQGNKHVMW KKVCNVFGKF CHQAAASVAI TLIASIVFML LVVLDAMKLP
001: MEHESKNKVD GMEMEKGKKE SGSRKGLELT MRVLALVLTM VAATVLGVAK QTKVVPIKLI PTLPPLNVST TAKASYLSAF VYNISANAIA CGYTAISIVI
101: VMISKGKRSK SLLMAVLIGD LMMVALLFSS TGAAGAIGLM GRHGNKHVMW KKVCGVFGKF CNQAAVSVAI TLIASVVFML LVVLDALKLP
101: VMISKGKRSK SLLMAVLIGD LMMVALLFSS TGAAGAIGLM GRHGNKHVMW KKVCGVFGKF CNQAAVSVAI TLIASVVFML LVVLDALKLP
Arabidopsis Description
CASP-like protein 1E1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8Z1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.