Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G167400.1 | Wheat | plasma membrane | 97.44 | 97.44 |
| HORVU3Hr1G032350.1 | Barley | plasma membrane | 97.44 | 97.44 |
| TraesCS3B01G190800.1 | Wheat | mitochondrion | 96.79 | 96.79 |
| GSMUA_Achr6P13870_001 | Banana | extracellular, plasma membrane | 57.69 | 56.25 |
| Os01t0237000-01 | Rice | golgi, plasma membrane, vacuole | 56.41 | 54.32 |
| TraesCS7A01G131000.1 | Wheat | plasma membrane | 52.56 | 50.62 |
| VIT_12s0028g03760.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 46.79 | 45.34 |
| KRH50041 | Soybean | plasma membrane | 44.87 | 43.75 |
| Bra034215.1-P | Field mustard | extracellular, plasma membrane | 45.51 | 43.29 |
| CDY48566 | Canola | extracellular, plasma membrane | 45.51 | 43.29 |
| CDY21972 | Canola | extracellular, plasma membrane | 44.87 | 42.68 |
| GSMUA_Achr3P03240_001 | Banana | plasma membrane | 52.56 | 41.84 |
| KRH25574 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 42.95 | 41.1 |
| AT4G03540.1 | Thale cress | extracellular, plasma membrane, vacuole | 42.95 | 40.85 |
| KRH55963 | Soybean | extracellular | 41.67 | 39.88 |
| AT1G03700.1 | Thale cress | plasma membrane | 40.38 | 38.41 |
| PGSC0003DMT400076357 | Potato | extracellular | 39.74 | 38.27 |
| CDY18177 | Canola | extracellular, plasma membrane, vacuole | 39.74 | 37.8 |
| CDX89875 | Canola | extracellular, plasma membrane, vacuole | 39.74 | 37.8 |
| Solyc02g078250.2.1 | Tomato | extracellular | 39.1 | 37.65 |
| KRH72716 | Soybean | extracellular | 33.33 | 36.88 |
| CDY70062 | Canola | extracellular | 28.21 | 36.67 |
| Bra015256.1-P | Field mustard | extracellular, plasma membrane, vacuole | 40.38 | 36.0 |
| KRH17069 | Soybean | extracellular, plasma membrane, vacuole | 38.46 | 35.93 |
| TraesCS5A01G049000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 35.26 | 28.06 |
| TraesCS7A01G384700.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid | 35.26 | 27.23 |
| TraesCS1A01G248700.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid, vacuole | 26.92 | 22.22 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G160200.1 | EnsemblPlantsGene:TraesCS3A01G160200 | InterPro:CASP/CASPL | InterPro:CASP_dom | PANTHER:PTHR11615 | PANTHER:PTHR11615:SF218 |
| PFAM:PF04535 | SEG:seg | SignalP:SignalP-TM | TIGRFAMs:TIGR01569 | TMHMM:TMhelix | MapMan:35.1 |
Description
No Description!
Coordinates
chr3A:+:160074462..160075122
Molecular Weight (calculated)
15888.8 Da
IEP (calculated)
9.758
GRAVY (calculated)
1.026
Length
156 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKARRFVVL ALRIATAAAA GVAAIVMATS HKTTTVFGVQ VQAKFQYTPS FVFFVAANVV ACAYSLLAIL VPPASPAARH VLVADAVLGM VLTGAGAAAA
101: AISALGKNGN SHAGWQPICG LVPTFCDHVT GALACGFVAV VLHLLVVLHS IYTMNS
101: AISALGKNGN SHAGWQPICG LVPTFCDHVT GALACGFVAV VLHLLVVLHS IYTMNS
001: MVKLTKRIGG LVLRLAAFGA ALAALIVMIT SRERASFLAI SLEAKYTDMA AFKYFVIANA VVSVYSFLVL FLPKESLLWK FVVVLDLVMT MLLTSSLSAA
101: LAVAQVGKKG NANAGWLPIC GQVPKFCDQI TGALIAGFVA LVLYVLLLLY SLHAVVDPFL LQKS
101: LAVAQVGKKG NANAGWLPIC GQVPKFCDQI TGALIAGFVA LVLYVLLLLY SLHAVVDPFL LQKS
Arabidopsis Description
CASP-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178V2N5]
SUBAcon: [plasma membrane,extracellular,vacuole]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.