Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- golgi 5
- plasma membrane 8
- endoplasmic reticulum 6
- vacuole 5
- cytosol 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG99735 | Soybean | endoplasmic reticulum, extracellular | 62.92 | 78.87 |
| AT1G48140.1 | Thale cress | plasma membrane | 77.53 | 77.53 |
| VIT_07s0005g04260.t01 | Wine grape | extracellular | 68.54 | 74.39 |
| Bra014103.1-P | Field mustard | plasma membrane | 73.03 | 73.03 |
| CDX77341 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 73.03 | 73.03 |
| CDY43303 | Canola | extracellular | 73.03 | 72.22 |
| CDY41856 | Canola | plasma membrane | 71.91 | 71.91 |
| GSMUA_Achr5P17200_001 | Banana | extracellular | 69.66 | 69.66 |
| GSMUA_Achr6P06900_001 | Banana | plasma membrane | 68.54 | 68.54 |
| TraesCS5D01G304200.1 | Wheat | endoplasmic reticulum | 68.54 | 68.54 |
| TraesCS5B01G296400.1 | Wheat | endoplasmic reticulum | 68.54 | 68.54 |
| EER93370 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 67.42 | 67.42 |
| TraesCS3A01G099500.1 | Wheat | endoplasmic reticulum | 66.29 | 66.29 |
| TraesCS3B01G115900.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 66.29 | 66.29 |
| TraesCS3D01G099800.1 | Wheat | endoplasmic reticulum | 66.29 | 66.29 |
| TraesCS5A01G297100.1 | Wheat | endoplasmic reticulum | 65.17 | 65.17 |
| EES12135 | Sorghum | plasma membrane | 66.29 | 64.13 |
| PGSC0003DMT400058609 | Potato | extracellular | 76.4 | 55.28 |
| Zm00001d034252_P003 | Maize | endoplasmic reticulum | 65.17 | 51.33 |
| Bra040366.1-P | Field mustard | extracellular | 64.04 | 48.72 |
| Solyc01g005110.2.1 | Tomato | cytosol | 21.35 | 47.5 |
| HORVU3Hr1G017960.1 | Barley | extracellular | 22.47 | 42.55 |
Protein Annotations
| EntrezGene:100775904 | MapMan:18.1.1.2.3 | EMBL:ACUP02005353 | InterPro:DPM3 | EnsemblPlantsGene:GLYMA_08G349000 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004582 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005783 | GO:GO:0005789 | GO:GO:0005975 | GO:GO:0006464 | GO:GO:0006486 | GO:GO:0006506 |
| GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0033185 | GO:GO:0035269 | UniProt:I1KZ46 |
| EnsemblPlants:KRH46656 | ProteinID:KRH46656 | ProteinID:KRH46656.1 | ProteinID:KRH46657.1 | PFAM:PF08285 | PANTHER:PTHR16433 |
| TMHMM:TMhelix | UniParc:UPI00023CADBD | : | : | : | : |
Description
hypothetical protein
Coordinates
chr8:+:46329739..46334457
Molecular Weight (calculated)
9838.5 Da
IEP (calculated)
8.056
GRAVY (calculated)
0.766
Length
89 amino acids
Sequence
(BLAST)
(BLAST)
1: MKHIVKILTL VMAITALWVG LLQTSMIPCS HTWLLPIYFV VSLGCYGLLM VGVGLMNFPT CPQEALLLQK DIVEAKEYLK QKGVDVSSS
1: MKHIVKILSL LVAISAFWIG LLQAAIIPRS HTWLLPIYFV VSLGCYGLLM VGVGLMQFPT CPQEAVLLQK DIAEAKDFFK HKGVDVGSN
Arabidopsis Description
DPMS3DPMS3 [Source:UniProtKB/TrEMBL;Acc:A0A178WDH1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.