Factsheet for Bra014103.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 8
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003423.1-P
Bra007547.1-P
Bra012567.1-P
Bra013361.1-P
Bra014481.1-P
Bra030034.1-P
Bra032817.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G48140.1	Bra030034.1-P	AT1G27300.1	21798944
AT1G48140.1	Bra032817.1-P	AT1G27300.1	21798944
AT1G48140.1	Bra003423.1-P	AT3G60600.1	21798944
AT1G48140.1	Bra007547.1-P	AT3G60600.1	21798944
AT1G48140.1	Bra014481.1-P	AT3G60600.1	21798944
AT1G48140.1	Bra012567.1-P	AT4G19030.1	21798944
AT1G48140.1	Bra013361.1-P	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41856	Canola	plasma membrane	98.88	98.88
AT1G48140.1	Thale cress	plasma membrane	94.38	94.38
EER93370	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	75.28	75.28
VIT_07s0005g04260.t01	Wine grape	extracellular	67.42	73.17
KRH46656	Soybean	plasma membrane	73.03	73.03
TraesCS5B01G296400.1	Wheat	endoplasmic reticulum	70.79	70.79
GSMUA_Achr5P17200_001	Banana	extracellular	70.79	70.79
TraesCS5A01G297100.1	Wheat	endoplasmic reticulum	70.79	70.79
TraesCS5D01G304200.1	Wheat	endoplasmic reticulum	70.79	70.79
TraesCS3A01G099500.1	Wheat	endoplasmic reticulum	70.79	70.79
TraesCS3B01G115900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	70.79	70.79
TraesCS3D01G099800.1	Wheat	endoplasmic reticulum	70.79	70.79
EES12135	Sorghum	plasma membrane	73.03	70.65
GSMUA_Achr6P06900_001	Banana	plasma membrane	69.66	69.66
KRG99735	Soybean	endoplasmic reticulum, extracellular	52.81	66.2
Bra040366.1-P	Field mustard	extracellular	80.9	61.54
Zm00001d034252_P003	Maize	endoplasmic reticulum	73.03	57.52
PGSC0003DMT400058609	Potato	extracellular	73.03	52.85
HORVU3Hr1G017960.1	Barley	extracellular	25.84	48.94
Solyc01g005110.2.1	Tomato	cytosol	21.35	47.5

Protein Annotations

MapMan:18.1.1.2.3	EnsemblPlantsGene:Bra014103	EnsemblPlants:Bra014103.1	EnsemblPlants:Bra014103.1-P	InterPro:DPM3	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005975	GO:GO:0006464
GO:GO:0006486	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0019538	GO:GO:0033185	UniProt:M4DC90	PFAM:PF08285	PANTHER:PTHR16433
TMHMM:TMhelix	UniParc:UPI000254690C	:	:	:	:

Description

AT1G48140 (E=5e-045) | dolichol-phosphate mannosyltransferase-related

Coordinates

chrA08:-:3431821..3432269

Molecular Weight (calculated)

9838.4 Da

IEP (calculated)

7.412

GRAVY (calculated)

0.801

Length

89 amino acids

Sequence
(BLAST)

1: MKHIVKILSL LVAISAFWIG LLQAAIVPRS YTWLLPIYFV VSLGCYGLLM VGIGLMQFPT CPQEAVLLQQ DIAEAKDFFK HKGVDVGSD

Best Arabidopsis Sequence Match ( AT1G48140.1 )
(BLAST)

1: MKHIVKILSL LVAISAFWIG LLQAAIIPRS HTWLLPIYFV VSLGCYGLLM VGVGLMQFPT CPQEAVLLQK DIAEAKDFFK HKGVDVGSN

Arabidopsis Description

DPMS3DPMS3 [Source:UniProtKB/TrEMBL;Acc:A0A178WDH1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.