Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- golgi 4
- plasma membrane 6
- endoplasmic reticulum 5
- vacuole 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX77341 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 94.38 | 94.38 |
| Bra014103.1-P | Field mustard | plasma membrane | 94.38 | 94.38 |
| CDY41856 | Canola | plasma membrane | 93.26 | 93.26 |
| CDY43303 | Canola | extracellular | 89.89 | 88.89 |
| KRH46656 | Soybean | plasma membrane | 77.53 | 77.53 |
| VIT_07s0005g04260.t01 | Wine grape | extracellular | 67.42 | 73.17 |
| EER93370 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 71.91 | 71.91 |
| GSMUA_Achr5P17200_001 | Banana | extracellular | 70.79 | 70.79 |
| TraesCS5A01G297100.1 | Wheat | endoplasmic reticulum | 67.42 | 67.42 |
| TraesCS5B01G296400.1 | Wheat | endoplasmic reticulum | 67.42 | 67.42 |
| TraesCS5D01G304200.1 | Wheat | endoplasmic reticulum | 67.42 | 67.42 |
| EES12135 | Sorghum | plasma membrane | 69.66 | 67.39 |
| GSMUA_Achr6P06900_001 | Banana | plasma membrane | 66.29 | 66.29 |
| TraesCS3A01G099500.1 | Wheat | endoplasmic reticulum | 66.29 | 66.29 |
| TraesCS3B01G115900.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 66.29 | 66.29 |
| TraesCS3D01G099800.1 | Wheat | endoplasmic reticulum | 66.29 | 66.29 |
| KRG99735 | Soybean | endoplasmic reticulum, extracellular | 52.81 | 66.2 |
| Zm00001d034252_P003 | Maize | endoplasmic reticulum | 69.66 | 54.87 |
| PGSC0003DMT400058609 | Potato | extracellular | 70.79 | 51.22 |
| HORVU3Hr1G017960.1 | Barley | extracellular | 23.6 | 44.68 |
| Solyc01g005110.2.1 | Tomato | cytosol | 19.1 | 42.5 |
Protein Annotations
| MapMan:18.1.1.2.3 | EntrezGene:841232 | UniProt:A0A178WDH1 | ProteinID:AAF79537.1 | ProteinID:AEE32253.1 | EMBL:AK118069 |
| ArrayExpress:AT1G48140 | EnsemblPlantsGene:AT1G48140 | RefSeq:AT1G48140 | TAIR:AT1G48140 | RefSeq:AT1G48140-TAIR-G | EnsemblPlants:AT1G48140.1 |
| TAIR:AT1G48140.1 | EMBL:AY085296 | EMBL:BT005626 | InterPro:DPM3 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004582 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 |
| GO:GO:0005789 | GO:GO:0005975 | GO:GO:0006464 | GO:GO:0006486 | GO:GO:0006506 | GO:GO:0006629 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016740 | GO:GO:0019538 | GO:GO:0033185 | GO:GO:0035269 | RefSeq:NP_564521.1 | ProteinID:OAP15831.1 |
| PFAM:PF08285 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR16433 |
| UniProt:Q8LEQ4 | TMHMM:TMhelix | UniParc:UPI000000C6D5 | : | : | : |
Description
DPMS3DPMS3 [Source:UniProtKB/TrEMBL;Acc:A0A178WDH1]
Coordinates
chr1:+:17781988..17784211
Molecular Weight (calculated)
9811.4 Da
IEP (calculated)
8.756
GRAVY (calculated)
0.775
Length
89 amino acids
Sequence
(BLAST)
(BLAST)
1: MKHIVKILSL LVAISAFWIG LLQAAIIPRS HTWLLPIYFV VSLGCYGLLM VGVGLMQFPT CPQEAVLLQK DIAEAKDFFK HKGVDVGSN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.