Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, nucleus, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 1
- endoplasmic reticulum 2
- plasma membrane 3
- extracellular 1
- vacuole 1
- golgi 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH75815 | Soybean | endoplasmic reticulum, extracellular, nucleus | 97.32 | 97.32 |
| KRH49272 | Soybean | endoplasmic reticulum | 80.36 | 77.59 |
| PGSC0003DMT400052348 | Potato | cytosol | 70.54 | 70.54 |
| Solyc09g013140.1.1 | Tomato | cytosol | 66.96 | 70.09 |
| VIT_08s0007g01800.t01 | Wine grape | cytosol | 37.5 | 64.62 |
| Bra034053.1-P | Field mustard | endoplasmic reticulum, nucleus, plasma membrane | 63.39 | 63.39 |
| CDY67515 | Canola | endoplasmic reticulum | 63.39 | 63.39 |
| CDY67522 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 63.39 | 63.39 |
| AT3G09085.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 62.5 | 62.5 |
| GSMUA_Achr6P33580_001 | Banana | mitochondrion | 62.5 | 61.95 |
| GSMUA_Achr11P... | Banana | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 60.71 | 61.82 |
| TraesCS4A01G091600.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 48.21 | 46.96 |
| TraesCS4D01G213900.1 | Wheat | cytosol, golgi, plasma membrane | 49.11 | 45.45 |
| Os03t0265800-01 | Rice | endoplasmic reticulum, mitochondrion, plasma membrane | 45.54 | 43.97 |
| KRH00155 | Soybean | plastid | 82.14 | 39.48 |
| KXG39720 | Sorghum | cytosol, golgi, peroxisome | 46.43 | 39.39 |
| Zm00001d028547_P001 | Maize | endoplasmic reticulum, golgi, plasma membrane | 47.32 | 39.26 |
| TraesCS4B01G213100.1 | Wheat | mitochondrion | 47.32 | 29.61 |
Protein Annotations
| EMBL:ACUP02001858 | EnsemblPlants:KRH66020 | EnsemblPlantsGene:GLYMA_03G077100 | EntrezGene:100806455 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:DUF962 | PANTHER:PTHR34205 | PANTHER:PTHR34205:SF2 | PFAM:PF06127 | ProteinID:KRH66020 |
| ProteinID:KRH66020.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0001BA4AE9 | UniProt:I1JLR8 | MapMan:35.2 |
Description
hypothetical protein
Coordinates
chr3:-:19061766..19062815
Molecular Weight (calculated)
13627.7 Da
IEP (calculated)
9.735
GRAVY (calculated)
0.189
Length
112 amino acids
Sequence
(BLAST)
(BLAST)
001: MNFRSLEDFW AFYMNQHSKA STRRWHFAGT LFSILFFFCS LLFSWWFLLL VPFSGYGCAF YSHLFVERNF PETLRHPFWS LMCDFKMFGF MLTGNMDREI
101: KRLGKRPVLQ VF
101: KRLGKRPVLQ VF
001: MNFRSFEEFW PFYMMQHSNP STRRLHFIGI IASIVALICS ILINWWFLAL VPLLGYGFAW YSHFFVEGNV PASFGHPLWS FLCDLKMFSL MLTGSMEREM
101: KRLGKRPLLQ LS
101: KRLGKRPLLQ LS
Arabidopsis Description
At3g09085 [Source:UniProtKB/TrEMBL;Acc:Q8LDK7]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.