Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, golgi, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- cytosol 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d028547_P001 | Maize | endoplasmic reticulum, golgi, plasma membrane | 87.12 | 85.19 |
| Os03t0265800-01 | Rice | endoplasmic reticulum, mitochondrion, plasma membrane | 74.24 | 84.48 |
| TraesCS4A01G091600.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 70.45 | 80.87 |
| TraesCS4D01G213900.1 | Wheat | cytosol, golgi, plasma membrane | 71.21 | 77.69 |
| GSMUA_Achr11P... | Banana | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 49.24 | 59.09 |
| GSMUA_Achr6P33580_001 | Banana | mitochondrion | 49.24 | 57.52 |
| Solyc09g013140.1.1 | Tomato | cytosol | 44.7 | 55.14 |
| PGSC0003DMT400052348 | Potato | cytosol | 46.21 | 54.46 |
| CDY67515 | Canola | endoplasmic reticulum | 44.7 | 52.68 |
| TraesCS4B01G213100.1 | Wheat | mitochondrion | 70.45 | 51.96 |
| Bra034053.1-P | Field mustard | endoplasmic reticulum, nucleus, plasma membrane | 43.94 | 51.79 |
| CDY67522 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 43.94 | 51.79 |
| KRH49272 | Soybean | endoplasmic reticulum | 45.45 | 51.72 |
| AT3G09085.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 43.18 | 50.89 |
| VIT_08s0007g01800.t01 | Wine grape | cytosol | 25.0 | 50.77 |
| KRH66020 | Soybean | endoplasmic reticulum, nucleus, plasma membrane, plastid | 39.39 | 46.43 |
| KRH75815 | Soybean | endoplasmic reticulum, extracellular, nucleus | 38.64 | 45.54 |
| KRH00155 | Soybean | plastid | 46.21 | 26.18 |
Protein Annotations
| EnsemblPlants:KXG39720 | EnsemblPlantsGene:SORBI_3001G426500 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:DUF962 |
| PANTHER:PTHR34205 | PANTHER:PTHR34205:SF2 | PFAM:PF06127 | ProteinID:KXG39720 | ProteinID:KXG39720.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI00081AC487 | UniProt:A0A1B6QP64 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr1:-:70588201..70589190
Molecular Weight (calculated)
14486.4 Da
IEP (calculated)
9.220
GRAVY (calculated)
0.096
Length
132 amino acids
Sequence
(BLAST)
(BLAST)
001: MGMSGGEASG KRQQFGSMEE FWGFYLSQHS KPGTRRWHFL GTLASLACAV LAAATGRAAI LLAAPVLGYG MAWYSHFFVE GNRPATFGHP VWSFICDYRM
101: VVLILTGRID AELARFRIRP TSDVAATSAH QD
101: VVLILTGRID AELARFRIRP TSDVAATSAH QD
001: MNFRSFEEFW PFYMMQHSNP STRRLHFIGI IASIVALICS ILINWWFLAL VPLLGYGFAW YSHFFVEGNV PASFGHPLWS FLCDLKMFSL MLTGSMEREM
101: KRLGKRPLLQ LS
101: KRLGKRPLLQ LS
Arabidopsis Description
At3g09085 [Source:UniProtKB/TrEMBL;Acc:Q8LDK7]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.