Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G091600.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 62.57 | 97.39 |
| TraesCS4D01G213900.1 | Wheat | cytosol, golgi, plasma membrane | 62.01 | 91.74 |
| Os03t0265800-01 | Rice | endoplasmic reticulum, mitochondrion, plasma membrane | 51.4 | 79.31 |
| KXG39720 | Sorghum | cytosol, golgi, peroxisome | 51.96 | 70.45 |
| Zm00001d028547_P001 | Maize | endoplasmic reticulum, golgi, plasma membrane | 51.96 | 68.89 |
| GSMUA_Achr6P33580_001 | Banana | mitochondrion | 37.99 | 60.18 |
| GSMUA_Achr11P... | Banana | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 36.87 | 60.0 |
| Solyc09g013140.1.1 | Tomato | cytosol | 34.64 | 57.94 |
| PGSC0003DMT400052348 | Potato | cytosol | 35.75 | 57.14 |
| Bra034053.1-P | Field mustard | endoplasmic reticulum, nucleus, plasma membrane | 34.64 | 55.36 |
| CDY67522 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 34.64 | 55.36 |
| CDY67515 | Canola | endoplasmic reticulum | 33.52 | 53.57 |
| AT3G09085.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 33.52 | 53.57 |
| KRH49272 | Soybean | endoplasmic reticulum | 34.08 | 52.59 |
| VIT_08s0007g01800.t01 | Wine grape | cytosol | 18.99 | 52.31 |
| KRH75815 | Soybean | endoplasmic reticulum, extracellular, nucleus | 29.61 | 47.32 |
| KRH66020 | Soybean | endoplasmic reticulum, nucleus, plasma membrane, plastid | 29.61 | 47.32 |
| KRH00155 | Soybean | plastid | 36.87 | 28.33 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G213100.1 | EnsemblPlantsGene:TraesCS4B01G213100 | InterPro:DUF962 | PANTHER:PTHR34205 | PANTHER:PTHR34205:SF2 | PFAM:PF06127 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr4B:-:451490493..451491032
Molecular Weight (calculated)
20209.4 Da
IEP (calculated)
10.176
GRAVY (calculated)
-0.218
Length
179 amino acids
Sequence
(BLAST)
(BLAST)
001: MHQIHRTVNR ITTCSIKIGS TSQLVASQPP YLEPRREGRY TDTSRQHIAI RQQPQPKQTE AMGKEFGSME EFWGFYLGQH SKPATRRWHF AGTLASLVCA
101: LLAAATGRAA LLVACPVLGY GLAWYSHFFV EGNRPATFGH PVWSFLCDYR MFALILTGRI DAELARLRIH PPRPRIASD
101: LLAAATGRAA LLVACPVLGY GLAWYSHFFV EGNRPATFGH PVWSFLCDYR MFALILTGRI DAELARLRIH PPRPRIASD
001: MNFRSFEEFW PFYMMQHSNP STRRLHFIGI IASIVALICS ILINWWFLAL VPLLGYGFAW YSHFFVEGNV PASFGHPLWS FLCDLKMFSL MLTGSMEREM
101: KRLGKRPLLQ LS
101: KRLGKRPLLQ LS
Arabidopsis Description
At3g09085 [Source:UniProtKB/TrEMBL;Acc:Q8LDK7]
SUBAcon: [cytosol,plasma membrane,endoplasmic reticulum]
SUBAcon: [cytosol,plasma membrane,endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.