Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- endoplasmic reticulum 1
- plasma membrane 2
- mitochondrion 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G091600.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 79.31 | 80.0 |
| TraesCS4D01G213900.1 | Wheat | cytosol, golgi, plasma membrane | 78.45 | 75.21 |
| Zm00001d028547_P001 | Maize | endoplasmic reticulum, golgi, plasma membrane | 87.07 | 74.81 |
| KXG39720 | Sorghum | cytosol, golgi, peroxisome | 84.48 | 74.24 |
| GSMUA_Achr11P... | Banana | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 60.34 | 63.64 |
| GSMUA_Achr6P33580_001 | Banana | mitochondrion | 60.34 | 61.95 |
| Solyc09g013140.1.1 | Tomato | cytosol | 51.72 | 56.07 |
| Bra034053.1-P | Field mustard | endoplasmic reticulum, nucleus, plasma membrane | 51.72 | 53.57 |
| PGSC0003DMT400052348 | Potato | cytosol | 51.72 | 53.57 |
| CDY67522 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 51.72 | 53.57 |
| CDY67515 | Canola | endoplasmic reticulum | 51.72 | 53.57 |
| VIT_08s0007g01800.t01 | Wine grape | cytosol | 29.31 | 52.31 |
| AT3G09085.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 50.0 | 51.79 |
| TraesCS4B01G213100.1 | Wheat | mitochondrion | 79.31 | 51.4 |
| KRH49272 | Soybean | endoplasmic reticulum | 50.86 | 50.86 |
| KRH75815 | Soybean | endoplasmic reticulum, extracellular, nucleus | 43.97 | 45.54 |
| KRH66020 | Soybean | endoplasmic reticulum, nucleus, plasma membrane, plastid | 43.97 | 45.54 |
| KRH00155 | Soybean | plastid | 52.59 | 26.18 |
Protein Annotations
| EnsemblPlants:Os03t0265800-01 | EnsemblPlantsGene:Os03g0265800 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:DUF962 |
| PANTHER:PTHR34205 | PANTHER:PTHR34205:SF2 | PFAM:PF06127 | ProteinID:BAF11566.1 | ProteinID:BAS83409.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI0000E11FF4 | UniProt:Q0DT72 | MapMan:35.2 | : | : |
Description
Protein of unknown function DUF2253, membrane domain containing protein. (Os03t0265800-01)
Coordinates
chr3:+:8788679..8789277
Molecular Weight (calculated)
12810.5 Da
IEP (calculated)
8.765
GRAVY (calculated)
0.198
Length
116 amino acids
Sequence
(BLAST)
(BLAST)
001: SMEEFWGFYL TQHSKPGTRR WHFLGTLAAL ACALLAAVSG RAAPLLAAPV LGYGMAWYSH FFVEGNRPAT FGHPVWSFLC DLRMFALILT GRIDAELARL
101: RLQPPHDAAA ASAHRD
101: RLQPPHDAAA ASAHRD
001: MNFRSFEEFW PFYMMQHSNP STRRLHFIGI IASIVALICS ILINWWFLAL VPLLGYGFAW YSHFFVEGNV PASFGHPLWS FLCDLKMFSL MLTGSMEREM
101: KRLGKRPLLQ LS
101: KRLGKRPLLQ LS
Arabidopsis Description
At3g09085 [Source:UniProtKB/TrEMBL;Acc:Q8LDK7]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.