Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G51510.1 | KRH56393 | AT4G26455.1 | 21798944 |
| AT3G51510.1 | KRH62532 | AT4G26455.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH67281 | Soybean | plastid | 85.96 | 55.37 |
| VIT_04s0044g00320.t01 | Wine grape | vacuole | 40.35 | 50.55 |
| KRG95603 | Soybean | plastid | 78.95 | 48.65 |
| Bra038904.1-P | Field mustard | plastid | 60.53 | 40.35 |
| CDY16301 | Canola | plastid | 60.53 | 40.35 |
| CDY33273 | Canola | plastid | 60.53 | 40.35 |
| GSMUA_Achr10P... | Banana | plastid | 64.04 | 39.67 |
| Os05t0490900-01 | Rice | plastid | 58.77 | 38.95 |
| CDX73716 | Canola | plastid | 59.65 | 36.56 |
| TraesCS1B01G319200.1 | Wheat | plastid | 54.39 | 36.47 |
| HORVU1Hr1G068500.3 | Barley | plastid | 53.51 | 36.09 |
| Bra036793.1-P | Field mustard | plastid | 58.77 | 36.02 |
| CDX78010 | Canola | plastid | 58.77 | 36.02 |
| AT3G51510.1 | Thale cress | plastid | 57.02 | 35.91 |
| TraesCS1D01G307900.1 | Wheat | plastid | 52.63 | 35.29 |
| TraesCS1A01G308500.1 | Wheat | plastid | 52.63 | 35.09 |
| Zm00001d038542_P001 | Maize | plastid | 49.12 | 33.14 |
| HORVU0Hr1G001170.1 | Barley | plastid | 52.63 | 30.77 |
| EES19726 | Sorghum | plastid | 48.25 | 30.39 |
| Solyc02g068270.2.1 | Tomato | extracellular, plastid | 56.14 | 29.77 |
Protein Annotations
| EMBL:ACUP02011675 | EnsemblPlants:KRG94039 | EnsemblPlantsGene:GLYMA_19G057100 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR36042 | ProteinID:KRG94039 | ProteinID:KRG94039.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0006EDB85E |
| UniProt:A0A0R0ET80 | MapMan:35.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr19:-:10444382..10444970
Molecular Weight (calculated)
12629.8 Da
IEP (calculated)
4.195
GRAVY (calculated)
-0.021
Length
114 amino acids
Sequence
(BLAST)
(BLAST)
001: MKTPHRLVVV AVTQGSTESS KSDEKIPSWA KPNFDEPPPW AQDEPNNNSS QQEGFEIPFY AYLLASAITA IATIGSLFEY VYQKPIFGVL SFDSLFYAPL
101: LGFFVFTDIP SSSV
101: LGFFVFTDIP SSSV
001: MAASLTSLPT GFCLSHGDEC CNRSPTKSPF PGHHPLAGRR KGHLLHYERS TVRRLVVTAA TEGSKKSKES EPSWANPDSD EPPPWARNEG RSSTSQESFE
101: VPFFVYLLAS AITAIAAIGS VFEYTSKNPV FGILESDSIF YTPVLGFFAL TGIPTSVFLW FKSVEAANKE AQEQDKRDGF L
101: VPFFVYLLAS AITAIAAIGS VFEYTSKNPV FGILESDSIF YTPVLGFFAL TGIPTSVFLW FKSVEAANKE AQEQDKRDGF L
Arabidopsis Description
AT3g51510/F26O13_150 [Source:UniProtKB/TrEMBL;Acc:Q9SCZ8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.