Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- nucleus 2
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G51510.1 | CDX89333 | AT4G26455.1 | 21798944 |
| AT3G51510.1 | CDX94330 | AT4G26455.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78010 | Canola | plastid | 90.86 | 90.86 |
| CDY16301 | Canola | plastid | 77.96 | 84.8 |
| CDY33273 | Canola | plastid | 77.96 | 84.8 |
| AT3G51510.1 | Thale cress | plastid | 75.27 | 77.35 |
| VIT_04s0044g00320.t01 | Wine grape | vacuole | 36.02 | 73.63 |
| KRG94039 | Soybean | cytosol | 36.56 | 59.65 |
| GSMUA_Achr10P... | Banana | plastid | 56.45 | 57.07 |
| KRH67281 | Soybean | plastid | 52.69 | 55.37 |
| Os05t0490900-01 | Rice | plastid | 47.85 | 51.74 |
| Zm00001d038542_P001 | Maize | plastid | 45.7 | 50.3 |
| TraesCS1B01G319200.1 | Wheat | plastid | 45.7 | 50.0 |
| TraesCS1D01G307900.1 | Wheat | plastid | 45.16 | 49.41 |
| TraesCS1A01G308500.1 | Wheat | plastid | 43.55 | 47.37 |
| EES19726 | Sorghum | plastid | 44.09 | 45.3 |
| HORVU1Hr1G068500.3 | Barley | plastid | 39.25 | 43.2 |
| KRG95603 | Soybean | plastid | 42.47 | 42.7 |
| HORVU0Hr1G001170.1 | Barley | plastid | 44.62 | 42.56 |
| Solyc02g068270.2.1 | Tomato | extracellular, plastid | 48.92 | 42.33 |
Protein Annotations
| EnsemblPlants:CDX73716 | EnsemblPlantsGene:GSBRNA2T00109314001 | GO:A0A078C9H2 | PANTHER:PTHR36042 | ProteinID:CDX73716 | ProteinID:CDX73716.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EE1624 | MapMan:35.2 | : | : |
Description
BnaC08g22870D
Coordinates
chrLK031799:-:2307307..2308363
Molecular Weight (calculated)
20371.7 Da
IEP (calculated)
6.508
GRAVY (calculated)
-0.261
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: MATSLASLPT SFCLNHVDEC CKRSPTKPSL SSYHPAAKRS LMGHSLRCHE FSSTARRFVV MAATEGSRKS KESQPSWANP DSDEPPPWAR DEGGSSSSTS
101: QESFEVPFFV YLLASAITAI AAIGSVFEYS SRNPVFGVLE SDSIFYTPVL GFFAFTGIPT SVFLWFKSVE AANKEAAEQD KRDGYR
101: QESFEVPFFV YLLASAITAI AAIGSVFEYS SRNPVFGVLE SDSIFYTPVL GFFAFTGIPT SVFLWFKSVE AANKEAAEQD KRDGYR
001: MAASLTSLPT GFCLSHGDEC CNRSPTKSPF PGHHPLAGRR KGHLLHYERS TVRRLVVTAA TEGSKKSKES EPSWANPDSD EPPPWARNEG RSSTSQESFE
101: VPFFVYLLAS AITAIAAIGS VFEYTSKNPV FGILESDSIF YTPVLGFFAL TGIPTSVFLW FKSVEAANKE AQEQDKRDGF L
101: VPFFVYLLAS AITAIAAIGS VFEYTSKNPV FGILESDSIF YTPVLGFFAL TGIPTSVFLW FKSVEAANKE AQEQDKRDGF L
Arabidopsis Description
AT3g51510/F26O13_150 [Source:UniProtKB/TrEMBL;Acc:Q9SCZ8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.