Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 5
- extracellular 7
- endoplasmic reticulum 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_09s0002g06380.t01 | Wine grape | cytosol | 53.93 | 59.66 |
| CDY54312 | Canola | extracellular | 53.71 | 55.41 |
| CDY57689 | Canola | extracellular | 53.71 | 55.03 |
| Bra003555.1-P | Field mustard | extracellular | 53.06 | 54.36 |
| AT1G80170.1 | Thale cress | extracellular | 51.75 | 53.38 |
| Solyc06g068040.2.1 | Tomato | nucleus | 50.0 | 52.4 |
| Solyc03g116500.2.1 | Tomato | nucleus | 51.09 | 51.77 |
| PGSC0003DMT400001638 | Potato | extracellular, plastid | 50.66 | 51.67 |
| GSMUA_Achr3P13670_001 | Banana | extracellular | 50.66 | 50.99 |
| EES18597 | Sorghum | extracellular | 42.36 | 47.55 |
| TraesCS1D01G370300.3 | Wheat | extracellular | 41.7 | 46.47 |
| TraesCS1B01G382200.2 | Wheat | extracellular | 41.7 | 46.14 |
| Zm00001d038874_P002 | Maize | extracellular | 41.48 | 46.12 |
| Os05t0542800-02 | Rice | extracellular | 42.58 | 45.77 |
| TraesCS1A01G364800.2 | Wheat | extracellular | 41.27 | 45.65 |
| KRH32949 | Soybean | extracellular | 40.83 | 42.69 |
| KRH71979 | Soybean | extracellular | 38.86 | 41.59 |
| HORVU1Hr1G079130.2 | Barley | extracellular | 39.3 | 41.47 |
| TraesCS1B01G382800.1 | Wheat | extracellular | 39.08 | 41.24 |
| TraesCS1D01G370800.1 | Wheat | extracellular | 39.08 | 41.24 |
| TraesCS1A01G365300.1 | Wheat | extracellular | 38.86 | 40.92 |
| Os05t0542900-01 | Rice | extracellular | 39.52 | 40.67 |
| TraesCS1D01G370700.1 | Wheat | extracellular | 37.12 | 40.57 |
| KRH13966 | Soybean | extracellular | 38.86 | 40.55 |
| KRH66955 | Soybean | extracellular | 41.05 | 40.52 |
| TraesCS3A01G024500.1 | Wheat | extracellular | 39.08 | 40.5 |
| TraesCS3B01G020300.1 | Wheat | extracellular | 39.08 | 40.41 |
| TraesCS1B01G382700.1 | Wheat | extracellular | 36.68 | 40.1 |
| TraesCS3D01G021700.1 | Wheat | extracellular | 38.43 | 39.91 |
| KRH23567 | Soybean | extracellular | 34.28 | 39.15 |
| KRH23942 | Soybean | extracellular | 37.55 | 39.09 |
| KRH39858 | Soybean | extracellular | 37.55 | 39.0 |
| KRH14715 | Soybean | cytosol, extracellular, nucleus, plastid | 29.26 | 38.62 |
| HORVU3Hr1G006180.2 | Barley | extracellular | 35.81 | 38.14 |
| Zm00001d038875_P001 | Maize | extracellular | 39.08 | 38.0 |
| KRH33163 | Soybean | extracellular, plastid | 39.3 | 37.74 |
| KRH48978 | Soybean | extracellular | 24.45 | 37.58 |
| KRH23786 | Soybean | cytosol, extracellular, nucleus, plastid | 29.48 | 37.5 |
| KRH66273 | Soybean | extracellular | 25.33 | 37.42 |
| KRH09740 | Soybean | extracellular | 34.5 | 37.18 |
| KXG22449 | Sorghum | extracellular, golgi | 37.77 | 36.97 |
| KRH66276 | Soybean | extracellular | 28.6 | 36.9 |
| KRH05150 | Soybean | extracellular | 21.62 | 36.8 |
| KRG88958 | Soybean | extracellular | 28.38 | 36.62 |
| TraesCS1A01G365200.1 | Wheat | extracellular | 36.68 | 36.6 |
| KRH56581 | Soybean | extracellular | 34.93 | 36.45 |
| KRG93260 | Soybean | extracellular | 35.15 | 36.34 |
| KRG96576 | Soybean | extracellular | 35.81 | 35.5 |
| KRH68311 | Soybean | extracellular | 35.59 | 35.28 |
| KRG95273 | Soybean | extracellular | 40.17 | 35.18 |
| KRH31755 | Soybean | extracellular | 36.03 | 34.74 |
| KRH69173 | Soybean | extracellular | 35.81 | 34.67 |
| KRG96690 | Soybean | extracellular | 34.72 | 34.64 |
| KRH66305 | Soybean | extracellular | 28.82 | 34.29 |
| HORVU1Hr1G079140.6 | Barley | plastid | 36.46 | 34.15 |
| KRH69612 | Soybean | extracellular | 32.97 | 32.68 |
| KRH74551 | Soybean | extracellular | 32.75 | 32.54 |
| KRH42407 | Soybean | extracellular | 33.84 | 32.02 |
| KRH36916 | Soybean | extracellular, nucleus | 32.53 | 31.43 |
| KRH58524 | Soybean | extracellular | 33.62 | 31.43 |
| KRH11881 | Soybean | extracellular | 32.53 | 31.11 |
| KRG99364 | Soybean | extracellular, nucleus | 34.06 | 29.0 |
| KRH45648 | Soybean | nucleus | 34.06 | 29.0 |
| KRG99363 | Soybean | extracellular | 40.17 | 20.89 |
Protein Annotations
| EntrezGene:100819195 | Gene3D:2.160.20.10 | MapMan:50.3.2 | EMBL:ACUP02009109 | EnsemblPlantsGene:GLYMA_15G009800 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004650 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005975 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0071555 |
| InterPro:Glyco_hydro_28 | InterPro:IPR012334 | UniProt:K7M8U7 | EnsemblPlants:KRH09752 | ProteinID:KRH09752 | ProteinID:KRH09752.1 |
| PFAM:PF00295 | ScanProsite:PS00502 | PANTHER:PTHR31375 | PANTHER:PTHR31375:SF91 | InterPro:PbH1 | InterPro:Pectin_lyas_fold |
| InterPro:Pectin_lyase_fold/virulence | SMART:SM00710 | SUPFAM:SSF51126 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000294FE9D |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr15:-:754231..758859
Molecular Weight (calculated)
50707.0 Da
IEP (calculated)
8.750
GRAVY (calculated)
-0.094
Length
458 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSLRYCSTS TFIIIFIHIN ILVTHAEGVD PVIQLPRSGL KRTRTRSKWV LSVGDYGAKG DGLHNDTEAF LEAWKIACSL SGFISVVFPY GKTFLVHPVD
101: IGGPCRSKIT LRISGTIVAP QDPVVWHGLN QRKWLYFHGV NHLTVDGGGR INGMGQEWWA RSCKINSTNP CHPAPTAMTF HRCKDLKVRN LMLINSQRMH
201: LSFTNCMRIV ASHLKVLAPA FSPNTDGIHI SATKGVEVRD SVIRTGDDCI SIVRNSSRVW IRNISCGPGH GISIGSLGKS KKWEKVQNVI VDGVYLYNTD
301: NGVRIKTWQG GSGFASKITF QHILMENVSN PIIVDQYYCD SRNPCKNETS AVRVENISFI DIQGTSATEE AIKFSCSDAF PCEGLYLENI FLASCFGGNT
401: SSFCWQAHGS ARGFLHPSTC LSSSDDRIRQ NVGMVGIKEA MEDEQAPTAC IYRLLVRI
101: IGGPCRSKIT LRISGTIVAP QDPVVWHGLN QRKWLYFHGV NHLTVDGGGR INGMGQEWWA RSCKINSTNP CHPAPTAMTF HRCKDLKVRN LMLINSQRMH
201: LSFTNCMRIV ASHLKVLAPA FSPNTDGIHI SATKGVEVRD SVIRTGDDCI SIVRNSSRVW IRNISCGPGH GISIGSLGKS KKWEKVQNVI VDGVYLYNTD
301: NGVRIKTWQG GSGFASKITF QHILMENVSN PIIVDQYYCD SRNPCKNETS AVRVENISFI DIQGTSATEE AIKFSCSDAF PCEGLYLENI FLASCFGGNT
401: SSFCWQAHGS ARGFLHPSTC LSSSDDRIRQ NVGMVGIKEA MEDEQAPTAC IYRLLVRI
001: MSYSRGGTLV TLLLLLVVAS SLALTANANS FESLLQLPRR QSRSTRPRSE RLLHVGNFGA KGNGVTDDTK AFADAWKTAC SSKVKTRILV PENYTCLLRP
101: IDLSGPCKAR LTLQISGTII APNDPDVWEG LNRRKWLYFH GLSRLTVEGG GTVNGMGQEW WERSCKHNHS NPCRGAPTAL TFHKCKNMRV ENLNVIDSQQ
201: MHIALTSCRR VTISGLKVIA PATSPNTDGI HISVSRGIVI DNTTVSTGDD CISIVKNSTQ ISISNIICGP GHGISIGSLG KSKSWEEVRD ITVDTAIISD
301: TANGVRIKTW QGGSGLVSKI IFRNIKMNNV SNPIIIDQYY CDSRKPCANQ TSAISIENIS FVHVRGTSAS KEAIKISCSD SSPCRNILLQ DIDLEPSNGD
401: GFTESFCWEA YGSSSGQVYP PPCLSDDTSF LEQSVQSGIT SAYL
101: IDLSGPCKAR LTLQISGTII APNDPDVWEG LNRRKWLYFH GLSRLTVEGG GTVNGMGQEW WERSCKHNHS NPCRGAPTAL TFHKCKNMRV ENLNVIDSQQ
201: MHIALTSCRR VTISGLKVIA PATSPNTDGI HISVSRGIVI DNTTVSTGDD CISIVKNSTQ ISISNIICGP GHGISIGSLG KSKSWEEVRD ITVDTAIISD
301: TANGVRIKTW QGGSGLVSKI IFRNIKMNNV SNPIIIDQYY CDSRKPCANQ TSAISIENIS FVHVRGTSAS KEAIKISCSD SSPCRNILLQ DIDLEPSNGD
401: GFTESFCWEA YGSSSGQVYP PPCLSDDTSF LEQSVQSGIT SAYL
Arabidopsis Description
Probable polygalacturonase At1g80170 [Source:UniProtKB/Swiss-Prot;Acc:Q94AJ5]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.