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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • nucleus 1
  • extracellular 7
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 5
  • golgi 4
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:extracellular
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH56581 Soybean extracellular 94.13 94.99
VIT_14s0066g01060.t01 Wine grape extracellular 72.23 66.25
CDX69569 Canola extracellular 64.33 64.92
Bra008748.1-P Field mustard extracellular 64.11 64.69
CDY09873 Canola extracellular 63.88 64.46
AT5G14650.1 Thale cress extracellular 61.4 62.53
Os05t0578600-01 Rice cytosol, extracellular 43.34 61.54
Os01t0637500-00 Rice cytosol, extracellular 46.05 60.35
HORVU3Hr1G031180.1 Barley extracellular 18.74 58.87
GSMUA_Achr4P02960_001 Banana extracellular 60.27 56.21
Solyc07g015870.2.1 Tomato extracellular 56.66 55.9
PGSC0003DMT400077010 Potato cytosol 57.79 55.29
GSMUA_Achr6P22080_001 Banana extracellular 60.05 54.85
GSMUA_Achr5P09080_001 Banana extracellular 58.47 53.18
GSMUA_Achr1P27280_001 Banana extracellular 59.37 51.57
KRH45648 Soybean nucleus 62.08 51.12
KRG99364 Soybean extracellular, nucleus 61.63 50.74
TraesCS1A01G418000.1 Wheat extracellular 57.56 50.0
EES20001 Sorghum extracellular 59.37 48.98
Os01t0636500-01 Rice extracellular 58.92 48.51
HORVU3Hr1G056270.10 Barley extracellular 58.24 48.5
EES01142 Sorghum extracellular 58.24 48.5
Zm00001d009667_P001 Maize extracellular, mitochondrion, plastid 56.43 48.45
TraesCS1B01G448100.1 Wheat extracellular 57.56 48.11
TraesCS3A01G225800.2 Wheat extracellular 58.24 47.87
TraesCS3B01G258600.2 Wheat extracellular 57.79 47.67
TraesCS1D01G425600.1 Wheat extracellular 56.66 47.63
Zm00001d044110_P001 Maize extracellular 58.24 47.6
TraesCS3D01G223900.1 Wheat extracellular 57.34 47.39
Zm00001d011444_P002 Maize extracellular 57.79 47.32
HORVU1Hr1G091430.5 Barley extracellular 57.11 45.67
KRG96576 Soybean extracellular 42.44 40.69
KRH68311 Soybean extracellular 42.44 40.69
KRH69173 Soybean extracellular 43.34 40.59
KRH74551 Soybean extracellular 41.99 40.35
KRH69612 Soybean extracellular 41.99 40.26
KRH31755 Soybean extracellular 42.89 40.0
KRH36916 Soybean extracellular, nucleus 42.21 39.45
KRH11881 Soybean extracellular 42.44 39.25
KRH71979 Soybean extracellular 37.7 39.02
KRG96690 Soybean extracellular 40.41 39.0
KRH66273 Soybean extracellular 27.09 38.71
KRH66276 Soybean extracellular 30.47 38.03
KRH23567 Soybean extracellular 34.31 37.91
KRH23786 Soybean cytosol, extracellular, nucleus, plastid 30.7 37.78
KRH14715 Soybean cytosol, extracellular, nucleus, plastid 29.57 37.75
KRH32949 Soybean extracellular 37.25 37.67
KRH05150 Soybean extracellular 22.8 37.55
KRH48978 Soybean extracellular 25.06 37.25
KRH42407 Soybean extracellular 40.63 37.19
KRH58524 Soybean extracellular 40.86 36.94
KRH13966 Soybean extracellular 36.34 36.67
KRG88958 Soybean extracellular 29.12 36.34
KRH09740 Soybean extracellular 34.09 35.53
KRH23942 Soybean extracellular 35.21 35.45
KRH09752 Soybean extracellular 36.34 35.15
KRH33163 Soybean extracellular, plastid 37.7 35.01
KRH66955 Soybean extracellular 36.57 34.91
KRH39858 Soybean extracellular 34.54 34.69
KRH66305 Soybean extracellular 29.12 33.51
KRG95273 Soybean extracellular 36.34 30.78
KRG99363 Soybean extracellular 36.79 18.5
Protein Annotations
Gene3D:2.160.20.10MapMan:21.3.5.1.3EntrezGene:547542EMBL:ACUP02011545EMBL:AF128266EnsemblPlantsGene:GLYMA_19G006200
GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005575GO:GO:0005576GO:GO:0005975
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016043GO:GO:0016787GO:GO:0016798
GO:GO:0071555InterPro:Glyco_hydro_28InterPro:IPR012334EnsemblPlants:KRG93260ProteinID:KRG93260ProteinID:KRG93260.1
PFAM:PF00295ScanProsite:PS00502PFscan:PS51257PANTHER:PTHR31375PANTHER:PTHR31375:SF34InterPro:PbH1
InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceUniProt:Q9SWS3SMART:SM00710SUPFAM:SSF51126SignalP:SignalP-TM
TMHMM:TMhelixUniParc:UPI000009D1FA::::
Description
hypothetical protein
Coordinates
chr19:+:590763..595425
Molecular Weight (calculated)
47337.6 Da
IEP (calculated)
6.156
GRAVY (calculated)
-0.178
Length
443 amino acids
Sequence
(BLAST)
001: MKNMNMKLNT IALIIAIAFS VWSSSCTAAR VSHWRKLKAA ASATSFNVLD YGAKGDGHAD DTKAFEDAWA AACKVEGSTM VVPSGSVFLV KPISFSGPNC
101: EPNIVFQLDG KIIAPTSSEA WGSGTLQWLE FSKLNTITIR GKGVIDGQGS VWWNNDSPTY NPTEVMLESN GRLPSTKPTA LRFYGSDGVT VTGITIQNSQ
201: QTHLKFDSCT NVQVSGISVS SPGDSPNTDG IHLQNSQNVV IYSSTLACGD DCVSIQTGCS DIYVHNVNCG PGHGISIGSL GRENTKACVR NVTVRDVTIQ
301: NTLTGVRIKT WQGGSGSVQN IMFSNVQVSG VQTPISIDQY YCDGGRCRNE SSAVAVSGIH YVNVKGTYTK EPIYFACSDN LPCSGITLDT IQLESAQETK
401: NSNVPFCWEA YGELKTTTVP PVECLQRGNP SKEGGINSNI DSC
Best Arabidopsis Sequence Match ( AT5G14650.1 )
(BLAST)
001: MCRLTLKCLS LNFLLLISLF SSRFGTCDAR YSVYWKGNRR SIAEGGSSGT INVLDHGAKG DGTSDDTKAF EDAWQVACKV AASTLLVPSG STFLVGPVSF
101: LGKECKEKIV FQLEGKIIAP TSASAWGSGL LQWIEFKALQ GITIKGKGII DGRGSVWWND MMGTKMPRTK PTALRFYGSN GVTVSGITIQ NSPQTHLKFD
201: NCISIQVSDF TTSSPGDSPN TDGIHLQNSQ DAVIYRSTLA CGDDCISIQT GCSNINIHDV DCGPGHGISI GGLGKDNTKA CVSNITVRDV TMHETTNGVR
301: IKSWQGGSGS VKQVMFSNIQ VSNVANPIII DQYYCDGGGC HNETSAVAVS NINYINIKGT YTKEPVRFAC SDSLPCTGIS LSTIELKPAT GKASSLDPFC
401: WKAHGELKTK TLPPIQCLKT EKSPEAASRS NNDAC
Arabidopsis Description
Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LYJ5]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.