CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH66276	Soybean	extracellular	100.0	87.32
KRH48978	Soybean	extracellular	55.48	57.72
KRH66305	Soybean	extracellular	59.68	48.05
KRH23786	Soybean	cytosol, extracellular, nucleus, plastid	44.19	38.06
KRH14715	Soybean	cytosol, extracellular, nucleus, plastid	42.58	38.04
KRH23567	Soybean	extracellular	47.1	36.41
KRG88958	Soybean	extracellular	41.61	36.34
KRH09740	Soybean	extracellular	47.1	34.35
PGSC0003DMT400056828	Potato	extracellular	42.58	33.17
KRH05150	Soybean	extracellular	27.42	31.6
PGSC0003DMT400008955	Potato	extracellular	34.84	31.03
TraesCS2B01G423300.1	Wheat	extracellular	39.68	30.67
TraesCS2A01G405300.1	Wheat	extracellular, nucleus	40.0	30.62
GSMUA_Achr9P22320_001	Banana	extracellular	40.32	30.27
TraesCS2B01G423400.1	Wheat	plastid	33.87	29.91
TraesCS2D01G402100.1	Wheat	extracellular	38.71	29.63
HORVU2Hr1G096130.1	Barley	extracellular	38.71	29.63
TraesCS2D01G402200.1	Wheat	extracellular	37.1	29.41
GSMUA_Achr11P...	Banana	extracellular	39.03	29.09
GSMUA_Achr4P13200_001	Banana	extracellular	38.71	28.44
TraesCS2A01G405100.1	Wheat	extracellular	37.74	28.06
KXG26899	Sorghum	extracellular	37.74	27.86
KRH56581	Soybean	extracellular	39.35	27.79
TraesCS2B01G423200.1	Wheat	extracellular	38.06	27.76
TraesCS2A01G405600.1	Wheat	extracellular	28.39	27.59
TraesCS2D01G402000.1	Wheat	extracellular	38.06	27.57
KRG93260	Soybean	extracellular	38.71	27.09
KRH71979	Soybean	extracellular	37.1	26.87
TraesCS2D01G402300.1	Wheat	extracellular	28.39	26.43
Zm00001d039668_P001	Maize	plastid	36.77	26.09
KRH32949	Soybean	extracellular	36.77	26.03
KRH09752	Soybean	extracellular	37.42	25.33
KRH13966	Soybean	extracellular	35.81	25.28
KRH23942	Soybean	extracellular	35.16	24.77
KRH39858	Soybean	extracellular	35.16	24.72
KRH33163	Soybean	extracellular, plastid	36.77	23.9
KRH36916	Soybean	extracellular, nucleus	36.13	23.63
KRG96576	Soybean	extracellular	35.16	23.59
KRH11881	Soybean	extracellular	36.13	23.38
KRH68311	Soybean	extracellular	34.84	23.38
KRH42407	Soybean	extracellular	36.45	23.35
KRH58524	Soybean	extracellular	36.45	23.06
KRH66955	Soybean	extracellular	34.52	23.06
KRH74551	Soybean	extracellular	34.19	22.99
KRH31755	Soybean	extracellular	35.16	22.95
KRH69173	Soybean	extracellular	34.84	22.83
KRH69612	Soybean	extracellular	33.87	22.73
KRG96690	Soybean	extracellular	33.55	22.66
KRH45648	Soybean	nucleus	38.39	22.12
KRG99364	Soybean	extracellular, nucleus	38.06	21.93
KRG95273	Soybean	extracellular	35.16	20.84
Os01t0172900-00	Rice	nucleus	19.35	20.34
GSMUA_Achr4P06370_001	Banana	extracellular	39.03	16.05
KRG99363	Soybean	extracellular	38.39	13.51

Protein Annotations

Gene3D:2.160.20.10	MapMan:50.3.2	UniProt:A0A0R0KH96	EMBL:ACUP02001933	EnsemblPlantsGene:GLYMA_03G095600	GO:GO:0003674
GO:GO:0003824	GO:GO:0004650	GO:GO:0005575	GO:GO:0005576	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	GO:GO:0016798	GO:GO:0071555
InterPro:Glyco_hydro_28	InterPro:IPR012334	EnsemblPlants:KRH66273	ProteinID:KRH66273	ProteinID:KRH66273.1	PFAM:PF00295
ScanProsite:PS00502	PANTHER:PTHR31375	PANTHER:PTHR31375:SF42	InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence
SMART:SM00710	SUPFAM:SSF51126	SignalP:SignalP-noTM	UniParc:UPI0006EDD901	:	:

Description

hypothetical protein

Coordinates

chr3:+:28259791..28263312

Molecular Weight (calculated)

32484.5 Da

IEP (calculated)

5.195

GRAVY (calculated)

0.130

Length

310 amino acids

Sequence
(BLAST)

001: MQSLITCVLI IAFISPCLCH RWNVGTQNTI YNVIDFGAVG DGKTDDTQLQ GVIVAPTKDA WVEGNLNTLI MISNVNGLTI DGSGGLIDGY GSAWWACKSC
101: PRPSVLIINS CNSVSVTNLN MINSPKSHIH VNGCEGATFS HINISAPGDS PNTDGFDIST SKNIMIEDST IATGDDCIAI SGGSSYINVT GIACGPGHGI
201: SIGSLGKKFD TVQEVYVRNC SFIRTTNGAR IKTFPNQAVE VSDVTYRGIH GTSLDGRAIT LDCGESGCYG IVLDQINIVS CLTGKSASCF CNNAHGTATA
301: TNPNCTCLLP

Best Arabidopsis Sequence Match ( AT3G15720.1 )
(BLAST)

001: MKKKTWFLNF SLFFLQIFTS SNALDVTQFG AVGDGVTDDS QAFLKAWEAV CSGTGDGQFV VPAGMTFMLQ PLKFQGSCKS TPVFVQMLGK LVAPSKGNWK
101: GDKDQWILFT DIEGLVIEGD GEINGQGSSW WEHKGSRPTA LKFRSCNNLR LSGLTHLDSP MAHIHISECN YVTISSLRIN APESSPNTDG IDVGASSNVV
201: IQDCIIATGD DCIAINSGTS NIHISGIDCG PGHGISIGSL GKDGETATVE NVCVQNCNFR GTMNGARIKT WQGGSGYARM ITFNGITLDN VENPIIIDQF
301: YNGGDSDNAK DRKSSAVEVS KVVFSNFIGT SKSEYGVDFR CSERVPCTEI FLRDMKIETA SSGSGQVAQG QCLNVRGAST IAVPGLECLE LSTDMFSSAQ
401: LLEQTCMSAQ SVQPRTTTQP MQDPIWVFQS RGKQLRVYNI AILVSFISLV TYILAR

Arabidopsis Description

Probable polygalacturonase At3g15720 [Source:UniProtKB/Swiss-Prot;Acc:Q9LW07]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.