Skip to main content
crop-pal logo
Wheat
Search for another protein from :
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2A01G405100.1 Wheat extracellular 92.76 95.2
TraesCS2B01G423200.1 Wheat extracellular 94.39 95.06
TraesCS2D01G402200.1 Wheat extracellular 73.36 80.31
TraesCS2D01G402100.1 Wheat extracellular 72.9 77.04
TraesCS2D01G402300.1 Wheat extracellular 57.94 74.47
KXG26899 Sorghum extracellular 57.24 58.33
KRH14715 Soybean cytosol, extracellular, nucleus, plastid 34.11 42.07
GSMUA_Achr11P... Banana extracellular 40.89 42.07
KRH23786 Soybean cytosol, extracellular, nucleus, plastid 34.81 41.39
AT4G35670.1 Thale cress extracellular 37.15 40.36
TraesCS5D01G470100.1 Wheat extracellular 38.55 40.24
VIT_09s0096g00850.t01 Wine grape cytoskeleton, cytosol, peroxisome 34.58 39.89
TraesCS1D01G129600.2 Wheat cytosol, extracellular, nucleus 29.91 39.51
CDY69377 Canola extracellular 36.68 39.25
CDY50769 Canola extracellular 31.31 39.18
KRG88958 Soybean extracellular 32.48 39.15
CDY47032 Canola extracellular 36.68 38.96
KRH48978 Soybean extracellular 27.1 38.93
AT5G44840.1 Thale cress extracellular 35.51 38.87
CDY39404 Canola extracellular 36.22 38.85
Bra025099.1-P Field mustard extracellular 36.22 38.75
CDX73440 Canola extracellular 36.22 38.75
AT5G44830.1 Thale cress extracellular 29.91 38.55
CDX72553 Canola extracellular 36.22 38.46
TraesCS5D01G470200.1 Wheat extracellular 37.62 38.42
VIT_09s0002g06610.t01 Wine grape extracellular 34.81 38.3
Bra025103.1-P Field mustard extracellular 35.75 38.25
TraesCS7D01G164200.1 Wheat extracellular 37.38 38.1
KRH66273 Soybean extracellular 27.57 38.06
KRH66276 Soybean extracellular 31.54 38.03
CDY39399 Canola extracellular 35.51 38.0
Solyc03g116580.2.1 Tomato extracellular 38.78 37.99
VIT_09s0002g06650.t01 Wine grape extracellular 35.28 37.38
VIT_09s0002g06580.t01 Wine grape cytosol 34.11 37.34
Solyc08g060970.2.1 Tomato nucleus 34.58 37.28
TraesCS3D01G130300.1 Wheat extracellular 34.58 36.91
KRH05150 Soybean extracellular 23.13 36.8
PGSC0003DMT400056828 Potato extracellular 34.11 36.68
PGSC0003DMT400008955 Potato extracellular 29.67 36.49
TraesCS4D01G243600.1 Wheat extracellular 36.92 36.49
KRH23567 Soybean extracellular 34.11 36.41
TraesCS1D01G066400.1 Wheat cytosol 31.31 35.17
KRH66305 Soybean extracellular 31.54 35.06
KRH09740 Soybean extracellular 34.81 35.06
CDX85471 Canola extracellular 33.18 34.98
TraesCS1D01G370300.3 Wheat extracellular 33.41 34.79
Bra001605.1-P Field mustard extracellular 36.45 34.51
TraesCS3D01G130400.1 Wheat extracellular 33.18 34.47
CDX75843 Canola extracellular 36.45 34.44
AT5G17200.1 Thale cress extracellular 33.64 34.2
Bra008572.1-P Field mustard extracellular 34.58 34.1
CDY58462 Canola extracellular 35.98 34.0
CDY02729 Canola extracellular 33.64 33.64
CDY16952 Canola extracellular 34.11 33.64
CDY30105 Canola extracellular 35.28 33.63
CDX69397 Canola extracellular 31.54 33.42
Bra011341.1-P Field mustard cytosol 30.61 33.33
Bra027211.1-P Field mustard extracellular 35.05 33.26
CDX97703 Canola extracellular 35.05 33.19
Bra023600.1-P Field mustard extracellular 33.18 33.18
CDY30107 Canola extracellular 35.28 33.11
CDX97704 Canola extracellular 35.28 33.11
TraesCS1D01G370700.1 Wheat extracellular 32.24 32.94
Bra027210.1-P Field mustard extracellular 35.05 32.89
AT3G15720.1 Thale cress extracellular 34.81 32.68
AT5G27530.1 Thale cress cytosol 34.81 32.53
CDX75239 Canola cytosol 30.61 32.27
CDX68839 Canola cytosol 30.61 32.27
TraesCS1D01G066300.1 Wheat extracellular, golgi 37.38 32.06
TraesCS1D01G370800.1 Wheat extracellular 32.01 31.57
AT4G32370.1 Thale cress extracellular 25.0 31.29
TraesCS1D01G311000.1 Wheat extracellular 34.58 30.9
TraesCS3D01G021700.1 Wheat extracellular 31.54 30.61
TraesCS7D01G326800.1 Wheat extracellular 34.35 30.12
CDY39884 Canola extracellular 31.07 29.89
TraesCS3D01G223900.1 Wheat extracellular 36.45 29.1
TraesCS1D01G425600.1 Wheat extracellular 35.75 29.03
Bra040077.1-P Field mustard extracellular 24.53 28.77
AT4G32380.1 Thale cress extracellular 29.67 28.04
AT4G32375.1 Thale cress extracellular 23.83 24.11
Protein Annotations
Gene3D:2.160.20.10MapMan:50.3.2GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005975
GO:GO:0008150GO:GO:0008152GO:GO:0016787InterPro:Glyco_hydro_28InterPro:IPR012334PFAM:PF00295
ScanProsite:PS00502PANTHER:PTHR31375PANTHER:PTHR31375:SF45InterPro:PbH1InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulence
SMART:SM00710SUPFAM:SSF51126SignalP:SignalP-noTMTMHMM:TMhelixEnsemblPlantsGene:TraesCS2D01G402000EnsemblPlants:TraesCS2D01G402000.1
SEG:seg:::::
Description
No Description!
Coordinates
chr2D:+:516862235..516864621
Molecular Weight (calculated)
44273.0 Da
IEP (calculated)
4.628
GRAVY (calculated)
0.029
Length
428 amino acids
Sequence
(BLAST)
001: MGIIGILRIA ILLLVGLAWC GVLVAGGGGV DGVFNVEDYG ALGDGTTDDT KAFVDAWAAA CGATGSSATL LMPAAKSFLV GLTRFSGPCA STRIIVQVLG
101: TITAPAASAW SEKKNYWLLF YQVDGLTVTG NNTGLLDGSG ETWWSDKCKH GDDDCVTKAP TALLVMNCTD VELSQFSSKD SPQMHIGLSM SGKVNVTQLT
201: ITAPEDSPNT DGVHVDRSED VHITGSTIGT GDDCISIGPG SRFVTVDGIV CGPGHGVSVG SLGRNGANES VEYIDVRNVQ FINTTNGARI KTWKGGRGYA
301: KSISFTNINF TNVDHPVIIN QFYEDRQDVS NTGAVALSNI TYTNLNGTST GKTAVDFDCS KNGSCMDIHV NTVAITAADG GATVARCQNA EVDTSGFVYP
401: KIPCVANAPS AGPPGPANAP SPSPGLST
Best Arabidopsis Sequence Match ( AT3G15720.1 )
(BLAST)
001: MKKKTWFLNF SLFFLQIFTS SNALDVTQFG AVGDGVTDDS QAFLKAWEAV CSGTGDGQFV VPAGMTFMLQ PLKFQGSCKS TPVFVQMLGK LVAPSKGNWK
101: GDKDQWILFT DIEGLVIEGD GEINGQGSSW WEHKGSRPTA LKFRSCNNLR LSGLTHLDSP MAHIHISECN YVTISSLRIN APESSPNTDG IDVGASSNVV
201: IQDCIIATGD DCIAINSGTS NIHISGIDCG PGHGISIGSL GKDGETATVE NVCVQNCNFR GTMNGARIKT WQGGSGYARM ITFNGITLDN VENPIIIDQF
301: YNGGDSDNAK DRKSSAVEVS KVVFSNFIGT SKSEYGVDFR CSERVPCTEI FLRDMKIETA SSGSGQVAQG QCLNVRGAST IAVPGLECLE LSTDMFSSAQ
401: LLEQTCMSAQ SVQPRTTTQP MQDPIWVFQS RGKQLRVYNI AILVSFISLV TYILAR
Arabidopsis Description
Probable polygalacturonase At3g15720 [Source:UniProtKB/Swiss-Prot;Acc:Q9LW07]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.