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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX69397 Canola extracellular 81.57 87.62
CDX85471 Canola extracellular 70.74 75.62
CDY02729 Canola extracellular 73.27 74.3
AT5G17200.1 Thale cress extracellular 66.59 68.65
CDY50769 Canola extracellular 35.02 44.44
CDY39404 Canola extracellular 39.4 42.86
PGSC0003DMT400056828 Potato extracellular 38.71 42.21
CDY69377 Canola extracellular 38.71 42.0
CDY39399 Canola extracellular 38.48 41.75
CDX73440 Canola extracellular 38.25 41.5
PGSC0003DMT400008955 Potato extracellular 32.72 40.8
CDX72553 Canola extracellular 37.56 40.45
CDY47032 Canola extracellular 37.33 40.2
CDX75843 Canola extracellular 40.78 39.07
CDX97704 Canola extracellular 41.01 39.04
CDY30107 Canola extracellular 41.01 39.04
CDY30105 Canola extracellular 40.32 38.98
CDX72025 Canola extracellular 38.48 38.66
CDY58462 Canola extracellular 40.32 38.63
CDX79907 Canola extracellular 38.71 38.62
CDX97703 Canola extracellular 40.09 38.5
CDY48768 Canola extracellular 38.25 38.16
GSMUA_Achr9P22320_001 Banana extracellular 36.18 38.01
CDY14791 Canola extracellular 37.79 37.88
CDY06902 Canola extracellular 37.56 37.64
TraesCS2B01G423400.1 Wheat plastid 30.41 37.61
TraesCS2D01G402100.1 Wheat extracellular 35.02 37.53
CDX67693 Canola extracellular 37.33 37.41
TraesCS2B01G423300.1 Wheat extracellular 34.56 37.41
TraesCS2D01G402200.1 Wheat extracellular 33.64 37.34
GSMUA_Achr11P... Banana extracellular 35.71 37.26
CDY56952 Canola extracellular 35.94 37.05
TraesCS2A01G405300.1 Wheat extracellular, nucleus 34.56 37.04
TraesCS2A01G405600.1 Wheat extracellular 27.19 36.99
TraesCS2D01G402300.1 Wheat extracellular 28.34 36.94
CDY37571 Canola cytosol 31.8 36.9
CDX74418 Canola extracellular 35.71 36.73
CDX75239 Canola cytosol 34.33 36.7
KXG26899 Sorghum extracellular 35.48 36.67
CDX68839 Canola cytosol 34.1 36.45
CDY38648 Canola cytosol 31.34 36.36
GSMUA_Achr4P13200_001 Banana extracellular 35.25 36.26
HORVU2Hr1G096130.1 Barley extracellular 33.64 36.05
TraesCS2A01G405100.1 Wheat extracellular 34.56 35.97
CDY35976 Canola extracellular 34.79 35.87
CDY28005 Canola extracellular 34.79 35.87
CDX74019 Canola extracellular 35.94 35.7
CDY07963 Canola extracellular 35.94 35.62
CDY39884 Canola extracellular 35.25 34.38
TraesCS2B01G423200.1 Wheat extracellular 33.41 34.12
TraesCS2D01G402000.1 Wheat extracellular 33.64 34.11
CDY04708 Canola plastid 20.74 32.49
CDX95284 Canola extracellular 29.49 31.68
CDY41695 Canola extracellular 31.57 31.49
CDY57689 Canola extracellular 32.03 31.1
CDY09873 Canola extracellular 31.34 30.98
CDY54312 Canola extracellular 31.57 30.86
CDX69569 Canola extracellular 31.11 30.75
CDY67535 Canola extracellular 21.66 30.23
Zm00001d039668_P001 Maize plastid 30.41 30.21
CDY54292 Canola cytosol 30.41 29.6
CDY25786 Canola cytosol 30.41 29.6
CDY47139 Canola extracellular 31.8 29.55
CDY11585 Canola extracellular 31.57 29.34
CDY06100 Canola extracellular 28.11 28.57
CDY44150 Canola extracellular, golgi, plastid 32.72 28.29
CDY61868 Canola extracellular 35.71 28.23
CDX77909 Canola extracellular 31.8 28.11
CDY71357 Canola extracellular, vacuole 20.51 28.08
CDX89966 Canola extracellular 31.57 27.9
CDX93644 Canola extracellular 30.18 27.75
CDY13645 Canola extracellular 29.95 27.66
CDY15246 Canola extracellular 31.11 27.49
CDY43307 Canola extracellular 29.95 27.48
CDX83631 Canola extracellular 29.49 27.18
Os01t0172900-00 Rice nucleus 18.2 26.78
CDY20962 Canola extracellular, golgi, vacuole 30.65 25.05
CDY54228 Canola extracellular, golgi, vacuole 30.41 25.0
CDY20612 Canola extracellular 30.41 24.86
CDY41445 Canola endoplasmic reticulum 31.57 24.64
CDY37962 Canola extracellular, golgi, vacuole 30.18 24.62
CDY34877 Canola extracellular, golgi 27.65 24.54
CDX93397 Canola extracellular, golgi, vacuole 29.72 24.2
CDY47212 Canola extracellular 28.34 22.95
CDY50367 Canola extracellular, golgi 28.11 22.76
GSMUA_Achr4P06370_001 Banana extracellular 34.1 19.63
Protein Annotations
Gene3D:2.160.20.10MapMan:50.3.2GO:A0A078FW16UniProt:A0A078FW16EnsemblPlants:CDY16952ProteinID:CDY16952
ProteinID:CDY16952.1GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005575GO:GO:0005576
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016043GO:GO:0016787
GO:GO:0016798GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00094882001InterPro:Glyco_hydro_28InterPro:IPR012334PFAM:PF00295
ScanProsite:PS00502PANTHER:PTHR31375PANTHER:PTHR31375:SF42InterPro:PbH1InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulence
SMART:SM00710SUPFAM:SSF51126SignalP:SignalP-noTMUniParc:UPI0004EEAD16SEG:seg:
Description
BnaC09g40790DBnaC09g40790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FW16]
Coordinates
chrLK032068:+:559234..561166
Molecular Weight (calculated)
46989.7 Da
IEP (calculated)
8.569
GRAVY (calculated)
-0.249
Length
434 amino acids
Sequence
(BLAST)
001: MKKSSLFFVL LCLFQISKLG FCLAGSVHTA NNNENKRHRF ISVTDFGAVC DGKTDDTQAF LKAWEAVCNG VSDKSFLVPL GKTCMLKPLK FAGPCKSSSI
101: TFVIRGNLVA PGYTWDVGNF PEWISFDSIN GLVVKGGGVK GGGTLDSRGS VWWGSGHAQD KDRPTAMHFN NCNGLRMYNL QHLNSPRNHI GLTGSKNISI
201: SGLNLTAPGD SPNTDGIDIS KCIGVDIRDS VISTGDDCIA INSGSSYINI TGLFCGPGHG ISVGSLGRNG EFATVEEVRV KNCTLSNTMN GVRIKTYQNG
301: LGYARKISFE DIRMVDSRNP IIIEQNYLNR GKIEEVSFEN SSYQNRGGKN RFYKTESGNG RGVKVSDVRY SRIYGSSASD EAVTFNCNAD MGCEDIVMDH
401: VNIVSAKAGQ GVSASCTNVR GSYFYSPINC IKKH
Best Arabidopsis Sequence Match ( AT5G17200.1 )
(BLAST)
001: MKSSLFFVLL CLFQINKLCF CLEEESLKVK NGFGSNGFIS VTSFGAIGDG KTDDTKAFLK AWEAVCKGGH NRKILVPQGK TFMLKPLTFI GPCKSSTISL
101: SIRGNLVAPG YTWYAGRYTT WISFDSINGL VVTGGGTIDG RGSLWWGNVN NRPCAMHFNN CNGLRISNLR HLNSPRNHVG LSCSQNIEVR GLRMTAPGDS
201: PNTDGIDISN CIGVHIHDSV IATGDDCIAI NSGSSHINIT GIFCGPGHGI SVGSLGVTGD FETVEEVRVK NCTFTKTQNG VRIKTYQNGS GYARKISFED
301: INMVASENPI IIDQTYHNGG TNGGISKSSS SYQNCHLTAK QRTPSGNGKG VKVTDVRYAR IRGSSASDQD ITLNCDADLG CSDIVMDNVN MVSATFGHKL
401: FSSCKNAHGS LFASKVDCLK H
Arabidopsis Description
Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FFI9]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.