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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • nucleus 1
  • plastid 2
  • extracellular 4
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:mitochondrion, nucleus, secretory
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:extracellular
Predotar:mitochondrion
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os01t0296200-00 Rice extracellular 52.41 61.28
Bra032600.1-P Field mustard extracellular 92.93 58.86
CDX77909 Canola extracellular 91.96 58.25
CDX89966 Canola extracellular 88.75 56.21
CDY15246 Canola extracellular 88.42 56.01
AT1G02460.1 Thale cress extracellular 87.78 55.6
KRG96576 Soybean extracellular 68.49 46.1
KRH68311 Soybean extracellular 68.49 46.1
KRH31755 Soybean extracellular 69.77 45.68
KRH69173 Soybean extracellular 69.45 45.67
VIT_07s0005g02090.t01 Wine grape extracellular 67.52 45.16
Solyc01g079130.1.1 Tomato extracellular 68.17 44.92
PGSC0003DMT400013344 Potato extracellular 68.17 44.92
GSMUA_Achr11P... Banana extracellular 60.45 43.12
CDX95284 Canola extracellular 55.31 42.57
CDY41695 Canola extracellular 55.95 40.0
HORVU1Hr1G067840.1 Barley extracellular, plastid 60.13 39.29
TraesCS1D01G311000.1 Wheat extracellular 60.13 39.04
Zm00001d009057_P001 Maize extracellular 53.05 39.01
TraesCS1A01G311100.1 Wheat extracellular 60.45 38.84
TraesCS1B01G322500.1 Wheat extracellular 60.13 38.64
CDY04708 Canola plastid 33.76 37.91
GSMUA_Achr9P16670_001 Banana extracellular, plasma membrane 59.81 37.13
CDY43307 Canola extracellular 55.63 36.58
CDX93644 Canola extracellular 55.31 36.44
Zm00001d040589_P001 Maize extracellular 56.59 35.27
EES00620 Sorghum extracellular 55.95 34.39
GSMUA_Achr3P08400_001 Banana extracellular 58.2 32.21
CDY09873 Canola extracellular 44.37 31.44
CDX69569 Canola extracellular 44.37 31.44
CDY71357 Canola extracellular, vacuole 29.58 29.02
CDY54312 Canola extracellular 40.19 28.15
CDY57689 Canola extracellular 40.19 27.96
CDY13645 Canola extracellular 40.84 27.02
CDY50769 Canola extracellular 29.58 26.9
CDX67693 Canola extracellular 37.3 26.79
CDX83631 Canola extracellular 40.51 26.75
CDY54228 Canola extracellular, golgi, vacuole 45.34 26.7
CDX72025 Canola extracellular 36.98 26.62
CDY20962 Canola extracellular, golgi, vacuole 45.02 26.37
CDY20612 Canola extracellular 45.02 26.37
CDY37962 Canola extracellular, golgi, vacuole 45.02 26.32
CDY47212 Canola extracellular 45.34 26.31
CDY50367 Canola extracellular, golgi 45.34 26.31
CDX93397 Canola extracellular, golgi, vacuole 45.02 26.27
CDY25786 Canola cytosol 37.62 26.23
CDX79907 Canola extracellular 36.66 26.21
CDY48768 Canola extracellular 36.66 26.21
CDY56952 Canola extracellular 35.37 26.13
CDY11585 Canola extracellular 39.23 26.12
CDY47139 Canola extracellular 39.23 26.12
CDY14791 Canola extracellular 36.33 26.1
CDY06902 Canola extracellular 36.33 26.1
CDX74418 Canola extracellular 35.37 26.07
CDY54292 Canola cytosol 37.3 26.01
CDY37571 Canola cytosol 31.19 25.94
CDY38648 Canola cytosol 30.55 25.4
CDX74019 Canola extracellular 35.37 25.17
CDY34877 Canola extracellular, golgi 39.55 25.15
CDY07963 Canola extracellular 35.37 25.11
CDY35976 Canola extracellular 32.8 24.23
CDY28005 Canola extracellular 32.8 24.23
CDX68839 Canola cytosol 30.87 23.65
CDX75239 Canola cytosol 30.87 23.65
CDY69377 Canola extracellular 29.9 23.25
CDX73440 Canola extracellular 29.58 23.0
CDY39399 Canola extracellular 29.58 23.0
CDY47032 Canola extracellular 29.58 22.83
CDY39404 Canola extracellular 29.26 22.81
CDX97703 Canola extracellular 33.12 22.79
CDX69397 Canola extracellular 29.58 22.77
CDY30105 Canola extracellular 32.8 22.72
CDY44150 Canola extracellular, golgi, plastid 36.66 22.71
CDX72553 Canola extracellular 29.26 22.58
CDX75843 Canola extracellular 32.8 22.52
CDX97704 Canola extracellular 32.8 22.37
CDY30107 Canola extracellular 32.8 22.37
CDY58462 Canola extracellular 32.48 22.3
CDY16952 Canola extracellular 30.23 21.66
CDX85471 Canola extracellular 27.97 21.43
CDY61868 Canola extracellular 36.98 20.95
CDY41445 Canola endoplasmic reticulum 36.98 20.68
CDY02729 Canola extracellular 28.3 20.56
CDY39884 Canola extracellular 29.26 20.45
CDY06100 Canola extracellular 19.94 14.52
Protein Annotations
Gene3D:2.160.20.10MapMan:50.3.2GO:A0A078JM76UniProt:A0A078JM76EnsemblPlants:CDY67535ProteinID:CDY67535
ProteinID:CDY67535.1GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005575GO:GO:0005576
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016043GO:GO:0016787
GO:GO:0016798GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00064379001InterPro:Glyco_hydro_28InterPro:IPR012334PFAM:PF00295
PANTHER:PTHR31375PANTHER:PTHR31375:SF43InterPro:PbH1InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00710
SUPFAM:SSF51126UniParc:UPI0004EE694A::::
Description
BnaAnng24580DBnaAnng24580D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JM76]
Coordinates
chrLK036217:+:5627..7471
Molecular Weight (calculated)
33790.3 Da
IEP (calculated)
6.010
GRAVY (calculated)
0.067
Length
311 amino acids
Sequence
(BLAST)
001: MAYIQYLFLP KKKIYTIFIT NYFVIFLQTV NKSAIVAGPC DSPIALRFFM SSNLTVEGLQ IKNSPQFHFR FDGCQGVHVE SLHITAPPLS PNTDGIHIEN
101: SNSVTIYNSV ISNGDDCVSI GSGSYDVDIR NLTCGPGGHG ISIGSLGNHN SHACVSNITV RDSVIKYSDN GVRIKTWQGG FGSVSGVTFN NIHVESVRNP
201: IIIDQYYCMT KDCANKTSAV FVSDITYQGI KGTYDIRSPP MHFGCSDAVP CTNLTLSGIE LLPEKGEIVV DPFCWNAYGI VEELSIPPVW CLMSDPPTAL
301: QGALVDKCGS P
Best Arabidopsis Sequence Match ( AT1G02460.1 )
(BLAST)
001: MLTSTYNRNQ VLGFMTLILT LMSLSEARNH HHKEKHKHNN HNHHSSKPKP PSSSISQPPT PPPGPPDSPA PSLPPSPSDD PADDNNGIYN VRKYGAVGDG
101: ETDDTEAFKT AWDSSCNNEN NTDSVLLVPY GYTFMIQSTI FTGPCRSYQF FQVDGTIVTP DGPESWPSNI SKRQWLVFYR VNGMALKGEG VIDGRGQKWW
201: DLPCKPHRSV NKSAIVTGPC DSPIALRFFM SSNLRVEGLQ IKNSPQFHFR FDGCQGVHVE SLHITAPPLS PNTDGIHIEN SNSVTIYNSI ISNGDDCVSI
301: GSGSYDVDIR NLTCGPGGHG ISIGSLGNHN SRACVSNITV RDSVIKYSDN GVRIKTWQGG SGSVSGVTFN NIHVDSVRNP IIIDQYYCMT KDCANKTSAV
401: FVSDIAYQGI KGTYDIRSPP MHFGCSDAVP CTNLTLSDIE LLPAKGEIVL DPFCWNAYGI AEELSIPPVW CLMSDPPKGL QGSLVDKCGS S
Arabidopsis Description
At1g02460 [Source:UniProtKB/TrEMBL;Acc:Q9FWX5]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.