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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • golgi 5
  • plasma membrane 5
  • endoplasmic reticulum 5
  • vacuole 5
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:nucleus
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX67693 Canola extracellular 73.04 92.61
AT3G57510.1 Thale cress extracellular 65.76 83.76
CDX72025 Canola extracellular 64.85 82.41
CDX79907 Canola extracellular 51.55 65.06
CDY48768 Canola extracellular 51.0 64.37
CDY14791 Canola extracellular 50.64 64.2
CDY06902 Canola extracellular 50.46 63.97
CDY06100 Canola extracellular 49.0 63.0
Solyc04g015530.1.1 Tomato cytosol 37.89 53.06
KRH71979 Soybean extracellular 40.8 52.34
VIT_08s0007g07750.t01 Wine grape extracellular 40.98 50.91
VIT_08s0007g08330.t01 Wine grape extracellular 41.17 50.9
VIT_08s0007g07780.t01 Wine grape extracellular 40.07 50.69
VIT_08s0007g07760.t01 Wine grape extracellular 40.07 50.57
VIT_08s0007g07770.t01 Wine grape extracellular 40.62 50.45
GSMUA_Achr10P... Banana cytosol, extracellular, nucleus 35.88 49.62
KRH66955 Soybean extracellular 39.16 46.34
KRH33163 Soybean extracellular, plastid 40.07 46.12
CDY35976 Canola extracellular 35.34 46.08
PGSC0003DMT400070039 Potato cytosol 34.24 45.85
CDY28005 Canola extracellular 35.15 45.84
Solyc10g080210.1.1 Tomato extracellular 37.7 45.3
CDY07963 Canola extracellular 36.07 45.21
CDX74019 Canola extracellular 35.52 44.62
KRG95273 Soybean extracellular 39.89 41.87
HORVU0Hr1G038940.1 Barley cytosol 30.78 41.83
KXG39856 Sorghum extracellular 32.06 40.93
GSMUA_Achr1P22940_001 Banana extracellular 32.42 40.36
TraesCS4B01G244300.1 Wheat extracellular 31.69 40.18
TraesCS4A01G066700.1 Wheat extracellular 31.51 39.95
TraesCS4D01G243600.1 Wheat extracellular 31.51 39.95
Os03t0216800-01 Rice extracellular 31.33 39.27
CDY37571 Canola cytosol 25.87 37.97
Zm00001d048079_P001 Maize extracellular 31.88 37.88
CDY54312 Canola extracellular 30.42 37.61
CDY57689 Canola extracellular 30.6 37.58
CDY04708 Canola plastid 18.94 37.55
CDY41695 Canola extracellular 29.69 37.47
CDY38648 Canola cytosol 25.32 37.17
CDY67535 Canola extracellular 20.95 36.98
CDX85471 Canola extracellular 27.32 36.95
CDY11585 Canola extracellular 30.97 36.4
CDX95284 Canola extracellular 26.59 36.14
CDY56952 Canola extracellular 27.69 36.1
CDY02729 Canola extracellular 28.05 35.98
CDY47139 Canola extracellular 30.6 35.97
CDX74418 Canola extracellular 27.5 35.78
CDX69569 Canola extracellular 28.6 35.76
CDY16952 Canola extracellular 28.23 35.71
CDY54292 Canola cytosol 28.78 35.43
CDY25786 Canola cytosol 28.78 35.43
CDX69397 Canola extracellular 26.05 35.4
CDY09873 Canola extracellular 28.23 35.31
CDX72553 Canola extracellular 25.87 35.24
CDY39404 Canola extracellular 25.32 34.84
CDY47032 Canola extracellular 25.5 34.74
CDX73440 Canola extracellular 25.14 34.5
CDY30105 Canola extracellular 28.05 34.3
CDX97703 Canola extracellular 28.23 34.29
CDY69377 Canola extracellular 24.95 34.25
CDY39399 Canola extracellular 24.95 34.25
CDY15246 Canola extracellular 30.24 33.81
CDY50769 Canola extracellular 20.95 33.63
CDX89966 Canola extracellular 30.05 33.6
CDX77909 Canola extracellular 29.69 33.2
CDY44150 Canola extracellular, golgi, plastid 30.24 33.07
CDX75843 Canola extracellular 27.14 32.89
CDY30107 Canola extracellular 27.14 32.68
CDY43307 Canola extracellular 28.05 32.56
CDX97704 Canola extracellular 26.96 32.46
CDY58462 Canola extracellular 26.78 32.45
CDX93644 Canola extracellular 27.69 32.2
CDY13645 Canola extracellular 27.32 31.91
CDX83631 Canola extracellular 27.32 31.85
CDY71357 Canola extracellular, vacuole 18.21 31.55
CDX75239 Canola cytosol 22.59 30.54
CDX68839 Canola cytosol 22.59 30.54
CDY39884 Canola extracellular 23.86 29.44
CDY41445 Canola endoplasmic reticulum 29.69 29.32
CDY54228 Canola extracellular, golgi, vacuole 27.69 28.79
CDY20612 Canola extracellular 27.5 28.44
CDY20962 Canola extracellular, golgi, vacuole 27.5 28.44
CDY50367 Canola extracellular, golgi 27.5 28.17
CDY47212 Canola extracellular 27.5 28.17
CDX93397 Canola extracellular, golgi, vacuole 27.32 28.14
CDY34877 Canola extracellular, golgi 24.95 28.02
CDY37962 Canola extracellular, golgi, vacuole 26.96 27.82
Protein Annotations
Gene3D:2.160.20.10MapMan:21.3.5.1.1GO:A0A078J9Q9UniProt:A0A078J9Q9EnsemblPlants:CDY61868ProteinID:CDY61868
ProteinID:CDY61868.1GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005575GO:GO:0005576
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016043GO:GO:0016787
GO:GO:0016798GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00034522001InterPro:Glyco_hydro_28InterPro:IPR012334PFAM:PF00295
ScanProsite:PS00502PFscan:PS51257PANTHER:PTHR31375PANTHER:PTHR31375:SF3InterPro:PbH1InterPro:Pectin_lyas_fold
InterPro:Pectin_lyase_fold/virulenceSMART:SM00710SUPFAM:SSF51126SignalP:SignalP-noTMUniParc:UPI0004EE569ESEG:seg
Description
BnaCnng38530DBnaCnng38530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J9Q9]
Coordinates
chrLK034053:+:14463..17860
Molecular Weight (calculated)
59133.2 Da
IEP (calculated)
8.644
GRAVY (calculated)
-0.289
Length
549 amino acids
Sequence
(BLAST)
001: MARCFGSLAV FLCVLLMLAC CQALSSNVDD GYGHEDGSFE SDSLIKLNND DDVLTLKSSD RPTTESSTVS VSNFGAKGDG KTDDTQAFKK AWKKACSTNG
101: VTTFLIPKGK TYLLKSIRFR GPCKSLRSFQ ILGTLSASTK RSDYSNDKNH WLILEDVNNL SIDGGSAGIV DGNGNIWWQN SCKIDKSKPC TKAPTALTLY
201: NLKNLNVKNL RVRNAQQIQI SIEKCNNVGV KNVKITAPGD SPNTDGIHIV ATKNIRISNS DIGTGDDCIS IEDGSQNVQI NDLTCGPGHG ISIGSLGDDN
301: SKAYVSGIDV DGATLSETDN GVRIKTYQGG SGTAKNIKFQ NIRMDNVKNP IIIDQNYCDK DKCEQQESAV QVNNVVYQNI KGTSATDVAI MFNCSVKYPC
401: QAAVGLLCSS TISVVAGGGG RGAAATVGTP ASMQLRHVLS TQPSMSWSRL SDKWRPPQSR AKMPAKTDKM VMTAKITTSV SIERWSELWH GWSREGGSMY
501: MVLGVVVVPS WSSSLAVTPN MRKSLESESL SGVLVGAKVT RNKCNVWLN
Best Arabidopsis Sequence Match ( AT3G57510.1 )
(BLAST)
001: MARCCRHLAV FLCVLLMLSL CKALSSNVDD GYGHEDGSFE SDSLLKLNND DVLSLISSDE TTLEASTVSV SNFGAKGDGK TDDTQAFKKA WKKACSTNGV
101: TTFLVPKGKT YLLKSTRFRG PCKSLRNFQI LGTLSASTKR SDYKDKNHWL ILEDVNNLSI DGGSTGIING NGKTWWQNSC KIDKSKPCTK APTALTLYNL
201: KNLNVKNLRV KNAQQIQISI EKCNKVEVSN VEITAPGDSP NTDGIHITNT QNIRVSNSDI GTGDDCISIE DGTQNLQIFD LTCGPGHGIS IGSLGDDNSK
301: AYVSGINVDG AKFSESDNGV RIKTYQGGSG TAKNIKFQNI RMENVKNPII IDQDYCDKDK CEDQESAVQV KNVVYKNISG TSATDVAITL NCSEKYPCQG
401: IVLENVKIKG GTASCKNANV KNQGTVSPKC S
Arabidopsis Description
ADPG1Polygalacturonase ADPG1 [Source:UniProtKB/Swiss-Prot;Acc:O23147]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.