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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, golgi

Predictor Summary:
  • plastid 2
  • extracellular 5
  • golgi 5
  • plasma membrane 4
  • endoplasmic reticulum 4
  • vacuole 4
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, golgi
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra031724.1-P Field mustard extracellular 96.93 92.04
CDY54228 Canola extracellular, golgi, vacuole 97.95 90.72
CDY37962 Canola extracellular, golgi, vacuole 92.02 84.59
CDX93397 Canola extracellular, golgi, vacuole 92.02 84.43
CDY20962 Canola extracellular, golgi, vacuole 90.39 83.24
CDY20612 Canola extracellular 89.98 82.86
AT1G10640.1 Thale cress extracellular, golgi 86.91 79.89
CDY47212 Canola extracellular 77.71 70.9
CDY50367 Canola extracellular, golgi 77.51 70.71
HORVU3Hr1G031180.1 Barley extracellular 19.84 68.79
VIT_01s0127g00400.t01 Wine grape extracellular, mitochondrion, plastid 67.48 63.71
PGSC0003DMT400035162 Potato extracellular 64.21 61.45
Solyc05g005170.2.1 Tomato nucleus 63.8 61.42
KRH45648 Soybean nucleus 65.24 59.29
KRG99364 Soybean extracellular, nucleus 64.62 58.74
Os05t0578600-01 Rice cytosol, extracellular 37.22 58.33
Os01t0637500-00 Rice cytosol, extracellular 39.26 56.8
GSMUA_Achr6P22080_001 Banana extracellular 55.83 56.29
GSMUA_Achr5P09080_001 Banana extracellular 56.03 56.26
GSMUA_Achr4P02960_001 Banana extracellular 54.4 56.0
CDY09873 Canola extracellular 47.85 53.3
CDX69569 Canola extracellular 47.85 53.3
HORVU3Hr1G056270.10 Barley extracellular 56.24 51.69
TraesCS3A01G225800.2 Wheat extracellular 56.85 51.58
GSMUA_Achr1P27280_001 Banana extracellular 53.78 51.57
EES01142 Sorghum extracellular 56.03 51.5
EES20001 Sorghum extracellular 56.24 51.21
TraesCS1A01G418000.1 Wheat extracellular 53.37 51.18
TraesCS3D01G223900.1 Wheat extracellular 55.83 50.93
Zm00001d044110_P001 Maize extracellular 56.44 50.92
Zm00001d011444_P002 Maize extracellular 56.24 50.83
TraesCS1B01G448100.1 Wheat extracellular 54.81 50.57
TraesCS3B01G258600.2 Wheat extracellular 55.42 50.47
Os01t0636500-01 Rice extracellular 55.42 50.37
TraesCS1D01G425600.1 Wheat extracellular 53.17 49.34
HORVU1Hr1G091430.5 Barley extracellular 54.81 48.38
Zm00001d009667_P001 Maize extracellular, mitochondrion, plastid 50.92 48.26
CDY13645 Canola extracellular 38.65 40.21
CDY67535 Canola extracellular 25.15 39.55
CDX83631 Canola extracellular 38.04 39.49
CDY43307 Canola extracellular 37.01 38.27
CDX93644 Canola extracellular 36.61 37.92
CDY41695 Canola extracellular 33.13 37.24
CDX95284 Canola extracellular 30.67 37.13
CDX77909 Canola extracellular 37.22 37.07
CDX89966 Canola extracellular 37.22 37.07
CDY15246 Canola extracellular 37.22 37.07
CDY56952 Canola extracellular 29.24 33.97
CDX74418 Canola extracellular 29.04 33.65
CDY54312 Canola extracellular 30.47 33.56
CDY57689 Canola extracellular 30.67 33.56
CDX72553 Canola extracellular 27.4 33.25
CDY47032 Canola extracellular 27.4 33.25
CDY39404 Canola extracellular 26.38 32.33
CDY25786 Canola cytosol 29.24 32.06
CDY54292 Canola cytosol 29.24 32.06
CDX67693 Canola extracellular 28.22 31.87
CDY39399 Canola extracellular 25.97 31.75
CDY69377 Canola extracellular 25.97 31.75
CDX72025 Canola extracellular 28.02 31.71
CDY50769 Canola extracellular 22.09 31.58
CDY11585 Canola extracellular 30.06 31.48
CDY47139 Canola extracellular 30.06 31.48
CDY04708 Canola plastid 17.79 31.41
CDY38648 Canola cytosol 23.93 31.28
CDX79907 Canola extracellular 27.81 31.26
CDY48768 Canola extracellular 27.61 31.03
CDY37571 Canola cytosol 23.72 31.02
CDX73440 Canola extracellular 25.36 31.0
CDY35976 Canola extracellular 26.58 30.88
CDY28005 Canola extracellular 26.38 30.64
CDY14791 Canola extracellular 26.79 30.25
CDX74019 Canola extracellular 26.79 29.98
CDY07963 Canola extracellular 26.79 29.91
CDX85471 Canola extracellular 24.74 29.8
CDY06902 Canola extracellular 26.38 29.79
CDY71357 Canola extracellular, vacuole 19.22 29.65
CDY02729 Canola extracellular 25.15 28.74
CDY44150 Canola extracellular, golgi, plastid 29.24 28.49
CDX97704 Canola extracellular 26.18 28.07
CDX75843 Canola extracellular 25.97 28.04
CDX97703 Canola extracellular 25.77 27.88
CDY30107 Canola extracellular 25.97 27.85
CDY30105 Canola extracellular 25.56 27.84
CDY58462 Canola extracellular 25.77 27.81
CDY16952 Canola extracellular 24.54 27.65
CDX68839 Canola cytosol 21.88 26.35
CDY41445 Canola endoplasmic reticulum 29.86 26.26
CDX75239 Canola cytosol 21.68 26.11
CDX69397 Canola extracellular 21.27 25.74
CDY61868 Canola extracellular 28.02 24.95
CDY39884 Canola extracellular 21.88 24.04
CDY06100 Canola extracellular 18.2 20.84
Protein Annotations
Gene3D:2.160.20.10MapMan:50.3.2GO:A0A078HAT1UniProt:A0A078HAT1EnsemblPlants:CDY34877ProteinID:CDY34877
ProteinID:CDY34877.1GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005575GO:GO:0005576
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016043GO:GO:0016787
GO:GO:0016798GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00057440001InterPro:Glyco_hydro_28InterPro:IPR012334PFAM:PF00295
ScanProsite:PS00502PANTHER:PTHR31375PANTHER:PTHR31375:SF58InterPro:PbH1InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulence
SMART:SM00710SUPFAM:SSF51126TMHMM:TMhelixUniParc:UPI0004EF0E0CSEG:seg:
Description
BnaA09g48030DBnaA09g48030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HAT1]
Coordinates
chrLK032342:+:288100..290775
Molecular Weight (calculated)
54030.1 Da
IEP (calculated)
8.892
GRAVY (calculated)
-0.296
Length
489 amino acids
Sequence
(BLAST)
001: MIMRKNLRMG SITMIMLMAV LVWSITLETC IARRGRHWRH NHRSSSDLSD SLSSKKPKSH SHHHSSHNNN HNHHHKSKPK PKPKLKTPPK SDHTKSPVVS
101: PPPKVQPPSL PPPKGSKVFN VMDFGAKGDG KCDDTKAFEA AWAAACKVEA SMMIIPPEYT FLVGPISFSG PYCQANIVFQ LDGTIIAPTD SKSWGKGLMW
201: WIDFTKLKGI KVQGKGVIDG RGSGWWQQDY PFIDGETKLI VPLNNSVPMP IRSEFDWKMP SIKPTALRFY GSVGVEVSGI TIQNNVLIHS STLACGDDCI
301: SIQTGCSNVY IHNINCGPGH GISIGSLGKD STKACVSNIT VRDVAMHNTM TGVRIKTWQG GVGSVKGILF SNIQLNEVQL PIVIDQFYCD HTTCKNQTSA
401: VAVEGVTYER IKGTYTVKPV HFACSDDFPC VDVQLSGIEL KPVQERYHMY DPFCWQTFGE LNSPTLPPID CLQIGKPARN RVQSDHDVC
Best Arabidopsis Sequence Match ( AT1G10640.1 )
(BLAST)
001: MIMRRSLSLR SITMMILMAV LVWSVTLETC IARRGRHWRH SHRSSSDLSD SLSNKKPKSH GNSHHHSSHN NNHHHKSKPK PKPKLKTPPK AHDNNSPVVS
101: GPPKVQPPPL PPQKGSQVFN VMDFGAKGDG KCDDTKAFEA AWVAACKIEA SVMLVPPEYT YLVGPISFSG PYCQANIVFQ LDGTIIAPTD SKTWGKGLMW
201: WIDFTKLKGI KVQGKGVIDG RGSGWWQQDS PFIDSDTKLI VPLNNSANQN PPMPIRSELD ERMPSIKPTA LRFSGSFGVE VTGITIQNSP QCHLKFDDCV
301: GVVVHDIAVS SPGDSPNTDG IHLQNTKDVL IHSTTLACGD DCISIQTGCS NVFVHNVNCG PGHGISIGSL GKEGTKACVS NITVRDVAMH NTMTGVRIKT
401: WQGGVGSVKG IIFSNIQLNQ VQIPITINQF YCDHSKCKNQ TSAVAVEGVT YERIKGTYTV KPVHFACSDN FPCVDVQLSS IELKPVQEKY RMYDAYCWQT
501: FGELNTPTLP PIDCLKIGKP PRNKVQSDHD VC
Arabidopsis Description
Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I5U6]
SUBAcon: [extracellular,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.