Factsheet for Os01t0636500-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0637500-00	Rice	cytosol, extracellular	61.71	98.22
HORVU3Hr1G031180.1	Barley	extracellular	23.61	90.07
EES01142	Sorghum	extracellular	86.06	87.03
HORVU3Hr1G056270.10	Barley	extracellular	84.94	85.9
TraesCS3A01G225800.2	Wheat	extracellular	85.5	85.34
Zm00001d011444_P002	Maize	extracellular	85.69	85.21
TraesCS3B01G258600.2	Wheat	extracellular	84.94	85.1
TraesCS3D01G223900.1	Wheat	extracellular	84.57	84.89
Zm00001d044110_P001	Maize	extracellular	84.01	83.39
Os05t0578600-01	Rice	cytosol, extracellular	47.96	82.69
GSMUA_Achr6P22080_001	Banana	extracellular	61.15	67.84
GSMUA_Achr5P09080_001	Banana	extracellular	60.41	66.74
GSMUA_Achr4P02960_001	Banana	extracellular	57.62	65.26
GSMUA_Achr1P27280_001	Banana	extracellular	58.92	62.16
VIT_01s0127g00400.t01	Wine grape	extracellular, mitochondrion, plastid	58.55	60.81
AT5G14650.1	Thale cress	extracellular	48.51	60.0
CDY09873	Canola	extracellular	48.7	59.68
CDX69569	Canola	extracellular	48.7	59.68
KRG99364	Soybean	extracellular, nucleus	59.67	59.67
KRH45648	Soybean	nucleus	59.48	59.48
Bra008748.1-P	Field mustard	extracellular	48.51	59.45
KRG93260	Soybean	extracellular	48.51	58.92
Bra031724.1-P	Field mustard	extracellular	55.39	57.86
VIT_14s0066g01060.t01	Wine grape	extracellular	51.86	57.76
PGSC0003DMT400035162	Potato	extracellular	54.83	57.73
Solyc05g005170.2.1	Tomato	nucleus	54.46	57.68
KRH56581	Soybean	extracellular	47.03	57.63
CDY37962	Canola	extracellular, golgi, vacuole	56.51	57.14
CDY54228	Canola	extracellular, golgi, vacuole	55.58	56.63
CDY47212	Canola	extracellular	56.32	56.53
CDY50367	Canola	extracellular, golgi	56.13	56.34
Bra027148.1-P	Field mustard	extracellular	56.13	56.34
Bra018429.1-P	Field mustard	extracellular, golgi, vacuole	55.58	56.31
CDY20612	Canola	extracellular	55.58	56.31
Bra019912.1-P	Field mustard	extracellular, golgi, vacuole	55.76	56.29
CDX93397	Canola	extracellular, golgi, vacuole	55.76	56.29
CDY20962	Canola	extracellular, golgi, vacuole	55.39	56.12
AT1G10640.1	Thale cress	extracellular, golgi	55.2	55.83
CDY34877	Canola	extracellular, golgi	50.37	55.42
AT1G60590.1	Thale cress	extracellular	55.39	55.19
Solyc07g015870.2.1	Tomato	extracellular	44.98	53.9
PGSC0003DMT400077010	Potato	cytosol	44.42	51.62
Os01t0296200-00	Rice	extracellular	25.28	51.13
Os01t0549000-00	Rice	extracellular	26.21	49.65
Os05t0279900-00	Rice	cytosol	26.95	46.03
Os05t0542800-02	Rice	extracellular	27.88	35.21
Os03t0216800-01	Rice	extracellular	28.07	34.47
Os03t0808000-00	Rice	extracellular	28.62	33.33
Os02t0130200-01	Rice	extracellular, golgi	30.67	32.48
Os05t0542900-01	Rice	extracellular	26.02	31.46
Os01t0172900-00	Rice	nucleus	16.17	29.49
Os01t0329300-01	Rice	plastid	37.17	26.35

Protein Annotations

Gene3D:2.160.20.10	MapMan:21.3.5.1.3	EntrezGene:4326573	ProteinID:BAD68931.1	ProteinID:BAF05580.1	ProteinID:BAS73338.1
ProteinID:EEE55052.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004650	GO:GO:0005575	GO:GO:0005576
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787
GO:GO:0016798	GO:GO:0071555	InterPro:Glyco_hydro_28	InterPro:IPR012334	EnsemblPlantsGene:Os01g0636500	EnsemblPlants:Os01t0636500-01
PFAM:PF00295	PANTHER:PTHR31375	PANTHER:PTHR31375:SF56	InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence
UniProt:Q5VNP4	SMART:SM00710	SUPFAM:SSF51126	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0000457FDB
RefSeq:XP_015611103.1	SEG:seg	:	:	:	:

Description

Similar to Polygalacturonase PG2. (Os01t0636500-01)

Coordinates

chr1:+:25513947..25518078

Molecular Weight (calculated)

57671.2 Da

IEP (calculated)

8.150

GRAVY (calculated)

-0.301

Length

538 amino acids

Sequence
(BLAST)

001: MKLRVKGLGL LLLLVLLALC STIDVCDARR GKHWRPRSSP SSSLLRNKGK GKKGSSNRQH GSNRPSPKPP LSPPPSPGNG KGYQSPYQPS PSPSPNAPVS
101: PSPVNGSGHA SPKSPTPSCG KGNQPPSRPT PTSPQGAVFN VVDFGAKGDG VSDDTKAFEA AWAAACKQGA STVVVPSELE FLVGPISFSG PYCKPNILFQ
201: LDGTIVAPTS AKAWGSGLLQ WIEFTKLNGV SIQGNGIING RGQQWWTYSD IDDDEDDDTQ YDVEFERMPQ VKPTALRFYG SFNVVVAGIT IVNSSQCHLK
301: FDSCQGVMVH DVTISSPENS LNTDGIHLQN SKDVSIHHTN LACGDDCVSI QTGCSNINIH NVNCGPGHGI SIGGLGRDNT KACVSNVTVR DVNMFRTMTG
401: VRIKTWQGGL GLVQDVRFSN IQVSEVQTPI IIDQFYCDKR TCSNQTSAVA VSGVQYENIR GTFTIKPVHF ACSDSSPCSG ITLTGVQLRP VQIPHYRLND
501: PFCWQAFGEL YTPTVPPIAC LHLGKPAGNN LQSYHDLC

Best Arabidopsis Sequence Match ( AT1G60590.1 )
(BLAST)

001: MITRESLTLR SITMMTLVTI LVWSATLETC IARRGRHWRH HHRSSSSLSD SLSSKKPKSH ENNHHHMSHK SKPKPKMKTQ PPKSNDGSPV VSQPPQVQQP
101: PPPHVQPPPT PLPLQPVEDS QQFNVLDFGA KGDGMSDDTQ AFEAAWASAC KVEASTMIIP PDYIFLVGPI SFSGPYCQAN IVFQLEGMIV APTDTESWGG
201: GLMWWIEFTK LSGITIQGNG VIDGRGTVWW QQDYLSDYPI DDDFKLIVPL NNSVQERPPM PIRSELNWRM PSIKPTALRF YGSIDVTVTG ITIQNSPQCH
301: LKFDNCVKVL VHDVNVSSPG DSPNTDGIHL QNTRDVMIHT TTLACGDDCI SIQTGCSNVY VHNVNCGPGH GISIGSLGKD STKACVSNIT VRDVVMHNTM
401: TGVRIKTWQG GIGSVKGILF SNIQLTEVQL PIVIDQFYCD HSKCMNHTSA VSVEGVTYEK IRGTYTVKPV HFACSDSFPC IDVQLSGIEL KPVQLQYHMY
501: DPFCWKTFGE LNSATVPPID CLQIGKPARN GVHSDHDICL

Arabidopsis Description

Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:O22699]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.