Factsheet for Os01t0637500-00

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G031180.1	Barley	extracellular	37.57	90.07
Os05t0578600-01	Rice	cytosol, extracellular	76.04	82.37
Os01t0636500-01	Rice	extracellular	98.22	61.71
EES01142	Sorghum	extracellular	90.53	57.52
Zm00001d011444_P002	Maize	extracellular	90.83	56.75
HORVU3Hr1G056270.10	Barley	extracellular	88.46	56.2
TraesCS3A01G225800.2	Wheat	extracellular	89.35	56.03
TraesCS3D01G223900.1	Wheat	extracellular	88.46	55.78
Zm00001d044110_P001	Maize	extracellular	89.35	55.72
TraesCS3B01G258600.2	Wheat	extracellular	88.46	55.68
Os01t0296200-00	Rice	extracellular	39.65	50.38
Os01t0549000-00	Rice	extracellular	41.42	49.3
GSMUA_Achr6P22080_001	Banana	extracellular	70.12	48.87
GSMUA_Achr5P09080_001	Banana	extracellular	68.93	47.84
GSMUA_Achr4P02960_001	Banana	extracellular	65.98	46.95
AT5G14650.1	Thale cress	extracellular	60.35	46.9
KRG93260	Soybean	extracellular	60.35	46.05
CDY09873	Canola	extracellular	59.76	46.01
CDX69569	Canola	extracellular	59.76	46.01
GSMUA_Achr1P27280_001	Banana	extracellular	69.23	45.88
Bra008748.1-P	Field mustard	extracellular	59.47	45.79
Os05t0279900-00	Rice	cytosol	42.31	45.4
KRH56581	Soybean	extracellular	58.88	45.33
VIT_01s0127g00400.t01	Wine grape	extracellular, mitochondrion, plastid	69.23	45.17
VIT_14s0066g01060.t01	Wine grape	extracellular	64.5	45.13
KRG99364	Soybean	extracellular, nucleus	70.71	44.42
KRH45648	Soybean	nucleus	70.41	44.24
Bra031724.1-P	Field mustard	extracellular	64.79	42.52
Solyc05g005170.2.1	Tomato	nucleus	63.61	42.32
PGSC0003DMT400035162	Potato	extracellular	63.91	42.27
Solyc07g015870.2.1	Tomato	extracellular	55.92	42.09
CDY50367	Canola	extracellular, golgi	66.57	41.98
CDY47212	Canola	extracellular	66.57	41.98
Bra027148.1-P	Field mustard	extracellular	66.27	41.79
CDY54228	Canola	extracellular, golgi, vacuole	64.79	41.48
CDY20612	Canola	extracellular	65.09	41.43
CDY37962	Canola	extracellular, golgi, vacuole	65.09	41.35
Bra018429.1-P	Field mustard	extracellular, golgi, vacuole	64.79	41.24
CDY20962	Canola	extracellular, golgi, vacuole	64.79	41.24
Bra019912.1-P	Field mustard	extracellular, golgi, vacuole	64.79	41.09
CDX93397	Canola	extracellular, golgi, vacuole	64.79	41.09
PGSC0003DMT400077010	Potato	cytosol	56.21	41.04
AT1G10640.1	Thale cress	extracellular, golgi	64.5	40.98
AT1G60590.1	Thale cress	extracellular	65.38	40.93
CDY34877	Canola	extracellular, golgi	56.8	39.26
Os05t0542800-02	Rice	extracellular	36.39	28.87
Os03t0216800-01	Rice	extracellular	36.39	28.08
Os03t0808000-00	Rice	extracellular	35.8	26.19
Os02t0130200-01	Rice	extracellular, golgi	37.87	25.2
Os05t0542900-01	Rice	extracellular	33.14	25.17
Os01t0329300-01	Rice	plastid	43.2	19.24
Os01t0172900-00	Rice	nucleus	16.27	18.64

Protein Annotations

Gene3D:2.160.20.10	MapMan:50.3.2	UniProt:A0A0P0V5N4	ProteinID:BAS73348.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004650	GO:GO:0005575	GO:GO:0005576	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	GO:GO:0016798	GO:GO:0071555	InterPro:Glyco_hydro_28
InterPro:IPR012334	EnsemblPlantsGene:Os01g0637500	EnsemblPlants:Os01t0637500-00	PFAM:PF00295	PANTHER:PTHR31375	PANTHER:PTHR31375:SF56
InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SMART:SM00710	SUPFAM:SSF51126	UniParc:UPI000393A13D
SEG:seg	:	:	:	:	:

Description

Similar to polygalacturonase. (Os01t0637500-00)

Coordinates

chr1:+:25582050..25583950

Molecular Weight (calculated)

36965.5 Da

IEP (calculated)

5.710

GRAVY (calculated)

-0.198

Length

338 amino acids

Sequence
(BLAST)

001: LDGTIVAPTS AKAWDSGLLQ WIEFTKLNGV SIQGNGIING RGQQWWTYSD TDDDENDDTQ YDVEFERMPQ VKPTALRFYG SFNVVVAGIT IVNSSQCHLK
101: FDSCQGVMVH DVTISSPENS LNTDGIHLQN SKDVSIHHTN LACGDDCVSI QTGCSNINIH NVNCGPGHGI SIGGLGRDNT KACVSNVTVR DVNMFRTMTG
201: VRIKTWQGGL GLVQDVRFSN IQVSEVQTPI IIDQFYCDER TCSNQTSAVA VSGVQYENIR GTFTIKPVHF ACSDSSPCSG ITLTGVQLRP VQISHYRLNN
301: PFCWQAFGEL YTPTVPPIAC LHLGKPAGNN LQSYHDLC

Best Arabidopsis Sequence Match ( AT1G60590.1 )
(BLAST)

001: MITRESLTLR SITMMTLVTI LVWSATLETC IARRGRHWRH HHRSSSSLSD SLSSKKPKSH ENNHHHMSHK SKPKPKMKTQ PPKSNDGSPV VSQPPQVQQP
101: PPPHVQPPPT PLPLQPVEDS QQFNVLDFGA KGDGMSDDTQ AFEAAWASAC KVEASTMIIP PDYIFLVGPI SFSGPYCQAN IVFQLEGMIV APTDTESWGG
201: GLMWWIEFTK LSGITIQGNG VIDGRGTVWW QQDYLSDYPI DDDFKLIVPL NNSVQERPPM PIRSELNWRM PSIKPTALRF YGSIDVTVTG ITIQNSPQCH
301: LKFDNCVKVL VHDVNVSSPG DSPNTDGIHL QNTRDVMIHT TTLACGDDCI SIQTGCSNVY VHNVNCGPGH GISIGSLGKD STKACVSNIT VRDVVMHNTM
401: TGVRIKTWQG GIGSVKGILF SNIQLTEVQL PIVIDQFYCD HSKCMNHTSA VSVEGVTYEK IRGTYTVKPV HFACSDSFPC IDVQLSGIEL KPVQLQYHMY
501: DPFCWKTFGE LNSATVPPID CLQIGKPARN GVHSDHDICL

Arabidopsis Description

Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:O22699]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.