CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011444_P002	Maize	extracellular	96.24	94.64
Zm00001d044110_P001	Maize	extracellular	94.55	92.8
Os01t0637500-00	Rice	cytosol, extracellular	57.52	90.53
HORVU3Hr1G031180.1	Barley	extracellular	23.68	89.36
Os01t0636500-01	Rice	extracellular	87.03	86.06
HORVU3Hr1G056270.10	Barley	extracellular	82.14	82.14
TraesCS3D01G223900.1	Wheat	extracellular	82.52	81.9
TraesCS3A01G225800.2	Wheat	extracellular	82.71	81.63
TraesCS3B01G258600.2	Wheat	extracellular	81.77	81.01
EES20001	Sorghum	extracellular	72.56	71.88
GSMUA_Achr6P22080_001	Banana	extracellular	61.65	67.63
GSMUA_Achr5P09080_001	Banana	extracellular	60.15	65.71
GSMUA_Achr4P02960_001	Banana	extracellular	58.08	65.05
GSMUA_Achr1P27280_001	Banana	extracellular	59.21	61.76
VIT_01s0127g00400.t01	Wine grape	extracellular, mitochondrion, plastid	58.46	60.04
AT5G14650.1	Thale cress	extracellular	49.06	60.0
KRG99364	Soybean	extracellular, nucleus	60.15	59.48
CDX69569	Canola	extracellular	49.06	59.45
Bra008748.1-P	Field mustard	extracellular	49.06	59.45
KRH45648	Soybean	nucleus	59.96	59.29
CDY09873	Canola	extracellular	48.87	59.23
Bra031724.1-P	Field mustard	extracellular	56.77	58.64
KRG93260	Soybean	extracellular	48.5	58.24
CDY37962	Canola	extracellular, golgi, vacuole	57.71	57.71
KRH56581	Soybean	extracellular	47.56	57.63
Bra019912.1-P	Field mustard	extracellular, golgi, vacuole	57.52	57.41
CDX93397	Canola	extracellular, golgi, vacuole	57.52	57.41
CDY54228	Canola	extracellular, golgi, vacuole	56.95	57.39
CDY20612	Canola	extracellular	57.14	57.25
VIT_14s0066g01060.t01	Wine grape	extracellular	51.88	57.14
PGSC0003DMT400035162	Potato	extracellular	54.89	57.14
Solyc05g005170.2.1	Tomato	nucleus	54.51	57.09
Bra018429.1-P	Field mustard	extracellular, golgi, vacuole	56.77	56.87
CDY20962	Canola	extracellular, golgi, vacuole	56.77	56.87
CDY50367	Canola	extracellular, golgi	57.14	56.72
CDY47212	Canola	extracellular	57.14	56.72
Bra027148.1-P	Field mustard	extracellular	56.58	56.16
CDY34877	Canola	extracellular, golgi	51.5	56.03
AT1G60590.1	Thale cress	extracellular	56.77	55.93
AT1G10640.1	Thale cress	extracellular, golgi	55.83	55.83
Solyc07g015870.2.1	Tomato	extracellular	45.68	54.12
PGSC0003DMT400077010	Potato	cytosol	45.3	52.05
KXG32718	Sorghum	extracellular	35.53	43.35
EES00620	Sorghum	extracellular	36.09	37.94
EES18597	Sorghum	extracellular	28.2	36.76
EER90686	Sorghum	plastid	29.32	35.78
KXG26899	Sorghum	extracellular	27.82	35.24
KXG39856	Sorghum	extracellular	28.38	35.12
KXG32428	Sorghum	mitochondrion	33.83	34.62
EER93240	Sorghum	extracellular	29.32	34.51
EER90681	Sorghum	extracellular	30.26	34.48
EES04449	Sorghum	extracellular	32.14	32.88
KXG31745	Sorghum	extracellular	25.56	31.55
KXG22449	Sorghum	extracellular, golgi	27.07	30.77
KXG32426	Sorghum	extracellular	36.09	27.75

Protein Annotations

Gene3D:2.160.20.10	MapMan:21.3.5.1.3	EntrezGene:8054932	UniProt:C5XEI6	EnsemblPlants:EES01142	ProteinID:EES01142
ProteinID:EES01142.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004650	GO:GO:0005575	GO:GO:0005576
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787
GO:GO:0016798	GO:GO:0071555	InterPro:Glyco_hydro_28	InterPro:IPR012334	PFAM:PF00295	PANTHER:PTHR31375
PANTHER:PTHR31375:SF56	InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SMART:SM00710	EnsemblPlantsGene:SORBI_3003G232600
SUPFAM:SSF51126	unigene:Sbi.19851	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001A84463	RefSeq:XP_002456022.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:57172781..57176753

Molecular Weight (calculated)

57212.7 Da

IEP (calculated)

8.083

GRAVY (calculated)

-0.314

Length

532 amino acids

Sequence
(BLAST)

001: MKLRAKGLGL LLLLVLLAIC STIEVSEARR GKHWRSSRSS PGSSQLKKGK GKKSSSRRQH GSNRPSPKPP VSSTPSSGAG KGNQNPYQPS PNAPPSPANG
101: SRHSTPKLPP TSSCGKGHQQ PSQPPPATSQ GAVFNVVDFG AKGDGVTDDT KAFEGAWAAA CNQGASTVLV PPELEFLVGP ISFSGPYCKP NIVFQLEGTI
201: LAPTSAKSWG SGLLQWLEFT KLNGIVIQGN GIINGRGQQW WTYLDPEDED DDDTYDVEFE RMPQIKPTAL RFYGSFNVVV AGITIVNSSQ CHLKFDNCQG
301: VMVHDVTISS PENSLNTDGI HLQNSKDVSI HHTNLACGDD CISIQTGCSN INIHNVNCGP GHGISIGGLG RDNTKACVSN VTVRDVNMFR TMNGVRIKTW
401: QGGVGLVQDI RFSNIQVSEV QTPIIIDQFY CDRSTCRNQT SAVAVSGVQY ENIRGTFTIK PVHFACSDSL PCSGISLTGV QLRPVQVPHY HLNNPFCWQA
501: FGELYTPTVP PIACLQIGKP AGNNLQSYDD IC

Best Arabidopsis Sequence Match ( AT1G60590.1 )
(BLAST)

001: MITRESLTLR SITMMTLVTI LVWSATLETC IARRGRHWRH HHRSSSSLSD SLSSKKPKSH ENNHHHMSHK SKPKPKMKTQ PPKSNDGSPV VSQPPQVQQP
101: PPPHVQPPPT PLPLQPVEDS QQFNVLDFGA KGDGMSDDTQ AFEAAWASAC KVEASTMIIP PDYIFLVGPI SFSGPYCQAN IVFQLEGMIV APTDTESWGG
201: GLMWWIEFTK LSGITIQGNG VIDGRGTVWW QQDYLSDYPI DDDFKLIVPL NNSVQERPPM PIRSELNWRM PSIKPTALRF YGSIDVTVTG ITIQNSPQCH
301: LKFDNCVKVL VHDVNVSSPG DSPNTDGIHL QNTRDVMIHT TTLACGDDCI SIQTGCSNVY VHNVNCGPGH GISIGSLGKD STKACVSNIT VRDVVMHNTM
401: TGVRIKTWQG GIGSVKGILF SNIQLTEVQL PIVIDQFYCD HSKCMNHTSA VSVEGVTYEK IRGTYTVKPV HFACSDSFPC IDVQLSGIEL KPVQLQYHMY
501: DPFCWKTFGE LNSATVPPID CLQIGKPARN GVHSDHDICL

Arabidopsis Description

Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:O22699]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.