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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • plastid 2
  • extracellular 5
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 3
  • golgi 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY50367 Canola extracellular, golgi 98.69 98.69
Bra027148.1-P Field mustard extracellular 98.13 98.13
AT1G60590.1 Thale cress extracellular 88.81 88.15
CDY54228 Canola extracellular, golgi, vacuole 77.61 78.79
CDY37962 Canola extracellular, golgi, vacuole 77.99 78.57
CDX93397 Canola extracellular, golgi, vacuole 77.8 78.24
CDY34877 Canola extracellular, golgi 70.9 77.71
CDY20962 Canola extracellular, golgi, vacuole 75.93 76.65
CDY20612 Canola extracellular 75.37 76.08
VIT_01s0127g00400.t01 Wine grape extracellular, mitochondrion, plastid 66.79 69.11
Os05t0578600-01 Rice cytosol, extracellular 39.93 68.59
HORVU3Hr1G031180.1 Barley extracellular 17.72 67.38
Os01t0637500-00 Rice cytosol, extracellular 41.98 66.57
KRH45648 Soybean nucleus 65.49 65.24
Solyc05g005170.2.1 Tomato nucleus 61.75 65.16
KRG99364 Soybean extracellular, nucleus 65.3 65.06
PGSC0003DMT400035162 Potato extracellular 61.75 64.77
GSMUA_Achr6P22080_001 Banana extracellular 58.58 64.74
GSMUA_Achr5P09080_001 Banana extracellular 57.65 63.45
GSMUA_Achr4P02960_001 Banana extracellular 55.78 62.95
CDX69569 Canola extracellular 49.44 60.36
CDY09873 Canola extracellular 49.25 60.14
GSMUA_Achr1P27280_001 Banana extracellular 56.72 59.61
HORVU3Hr1G056270.10 Barley extracellular 57.09 57.52
TraesCS1A01G418000.1 Wheat extracellular 54.48 57.25
EES01142 Sorghum extracellular 56.72 57.14
TraesCS3A01G225800.2 Wheat extracellular 57.28 56.96
TraesCS3D01G223900.1 Wheat extracellular 56.9 56.9
TraesCS3B01G258600.2 Wheat extracellular 56.72 56.61
EES20001 Sorghum extracellular 56.53 56.42
TraesCS1B01G448100.1 Wheat extracellular 55.78 56.42
Os01t0636500-01 Rice extracellular 56.53 56.32
Zm00001d044110_P001 Maize extracellular 56.9 56.27
Zm00001d011444_P002 Maize extracellular 56.53 56.01
TraesCS1D01G425600.1 Wheat extracellular 54.29 55.22
Zm00001d009667_P001 Maize extracellular, mitochondrion, plastid 52.05 54.07
HORVU1Hr1G091430.5 Barley extracellular 55.6 53.79
CDY13645 Canola extracellular 40.67 46.38
CDX83631 Canola extracellular 39.93 45.44
CDY67535 Canola extracellular 26.31 45.34
CDY43307 Canola extracellular 38.06 43.13
CDX93644 Canola extracellular 37.87 43.01
CDY41695 Canola extracellular 34.33 42.3
CDX95284 Canola extracellular 31.72 42.08
CDY15246 Canola extracellular 36.57 39.92
CDX77909 Canola extracellular 36.57 39.92
CDX89966 Canola extracellular 36.38 39.71
CDY04708 Canola plastid 19.22 37.18
CDY11585 Canola extracellular 32.09 36.83
CDY47139 Canola extracellular 32.09 36.83
CDY50769 Canola extracellular 23.32 36.55
CDY38648 Canola cytosol 25.37 36.36
CDY56952 Canola extracellular 28.54 36.34
CDY54292 Canola cytosol 30.22 36.32
CDX74418 Canola extracellular 28.54 36.26
CDY39399 Canola extracellular 27.05 36.25
CDY57689 Canola extracellular 30.22 36.24
CDY37571 Canola cytosol 25.19 36.1
CDY54312 Canola extracellular 29.85 36.04
CDY69377 Canola extracellular 26.87 36.0
CDY25786 Canola cytosol 29.85 35.87
CDY39404 Canola extracellular 26.68 35.84
CDY47032 Canola extracellular 26.87 35.73
CDX73440 Canola extracellular 26.49 35.5
CDX67693 Canola extracellular 28.54 35.33
CDX72553 Canola extracellular 26.31 34.99
CDX72025 Canola extracellular 27.99 34.72
CDY71357 Canola extracellular, vacuole 20.52 34.7
CDX79907 Canola extracellular 27.8 34.25
CDY07963 Canola extracellular 27.8 34.02
CDX74019 Canola extracellular 27.61 33.87
CDY28005 Canola extracellular 26.49 33.73
CDY35976 Canola extracellular 26.49 33.73
CDY48768 Canola extracellular 27.24 33.56
CDY14791 Canola extracellular 27.05 33.49
CDY06902 Canola extracellular 26.68 33.03
CDY44150 Canola extracellular, golgi, plastid 30.22 32.27
CDX85471 Canola extracellular 23.88 31.53
CDX68839 Canola cytosol 22.76 30.05
CDY41445 Canola endoplasmic reticulum 30.97 29.86
CDX75239 Canola cytosol 22.57 29.8
CDY02729 Canola extracellular 23.69 29.67
CDX75843 Canola extracellular 25.0 29.58
CDY58462 Canola extracellular 24.63 29.14
CDX97704 Canola extracellular 24.25 28.51
CDY16952 Canola extracellular 22.95 28.34
CDX97703 Canola extracellular 23.88 28.32
CDY30107 Canola extracellular 24.07 28.29
CDY30105 Canola extracellular 23.51 28.06
CDY39884 Canola extracellular 22.95 27.64
CDY61868 Canola extracellular 28.17 27.5
CDX69397 Canola extracellular 20.71 27.48
CDY06100 Canola extracellular 19.03 23.89
Protein Annotations
MapMan:50.3.2GO:A0A078IAM8UniProt:A0A078IAM8EnsemblPlants:CDY47212ProteinID:CDY47212ProteinID:CDY47212.1
GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005575GO:GO:0005576GO:GO:0005975
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016043
GO:GO:0016787GO:GO:0016798GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00086922001InterPro:Glyco_hydro_28PFAM:PF00295
ScanProsite:PS00502PANTHER:PTHR31375PANTHER:PTHR31375:SF58InterPro:PbH1InterPro:Pectin_lyase_fold/virulenceSMART:SM00710
SUPFAM:SSF51126TMHMM:TMhelixUniParc:UPI0004EE4F76SEG:seg::
Description
BnaC09g14610DBnaC09g14610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IAM8]
Coordinates
chrLK032703:+:22228..24999
Molecular Weight (calculated)
58653.1 Da
IEP (calculated)
7.030
GRAVY (calculated)
-0.197
Length
536 amino acids
Sequence
(BLAST)
001: MITRESQRLR SVTIMILMVI LVWSVTLQTC IARKGRHWRH HHSSSSSSST LSDSLSSKKP KSHHNSHSHK SKPQLKTPPP KSGSPVLPQP PQVQPPPSPQ
101: VQPPPTAPLP LQPLEGSQEF NVLDFGAKGD GMSDDTEAFE AAWASACKVE ASTMVIPPDY IFLVGPISFS GPYCQANIVF QLDGMIVAPT DSESWGRGLL
201: WWIEFTKLKG ITIQGNGVID GRGTGWWQQD NPFDYPVDDD FKLIVPLNNT VQERPPMPIR SELNGMPSIK PTALRFYGSI DVTVTGITIQ NSPQCHLKFD
301: NCVQVLVHDV TVSSPGDSPN TDGIHLQNTR DVMIHTSTLA CGDDCISIQT GCSNVYVHNV NCGPGHGISI GSLGKDSTKA CVSNITVRDV VMHNTMTGVR
401: IKTWQGGVGS VKGVLFSNIQ LTEVQLPIVI DQFYCDHSKC RNQTSAVAVE GVTYEKIRGT YTVKPVHFAC SDSFPCVDVQ LSGIELKPVQ LQYHMYDPFC
501: WKAFGLLNSP TVPPIDCLQI GKPARNGVHT DHDICV
Best Arabidopsis Sequence Match ( AT1G60590.1 )
(BLAST)
001: MITRESLTLR SITMMTLVTI LVWSATLETC IARRGRHWRH HHRSSSSLSD SLSSKKPKSH ENNHHHMSHK SKPKPKMKTQ PPKSNDGSPV VSQPPQVQQP
101: PPPHVQPPPT PLPLQPVEDS QQFNVLDFGA KGDGMSDDTQ AFEAAWASAC KVEASTMIIP PDYIFLVGPI SFSGPYCQAN IVFQLEGMIV APTDTESWGG
201: GLMWWIEFTK LSGITIQGNG VIDGRGTVWW QQDYLSDYPI DDDFKLIVPL NNSVQERPPM PIRSELNWRM PSIKPTALRF YGSIDVTVTG ITIQNSPQCH
301: LKFDNCVKVL VHDVNVSSPG DSPNTDGIHL QNTRDVMIHT TTLACGDDCI SIQTGCSNVY VHNVNCGPGH GISIGSLGKD STKACVSNIT VRDVVMHNTM
401: TGVRIKTWQG GIGSVKGILF SNIQLTEVQL PIVIDQFYCD HSKCMNHTSA VSVEGVTYEK IRGTYTVKPV HFACSDSFPC IDVQLSGIEL KPVQLQYHMY
501: DPFCWKTFGE LNSATVPPID CLQIGKPARN GVHSDHDICL
Arabidopsis Description
Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:O22699]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.