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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY28005 Canola extracellular 98.57 98.57
Bra029690.1-P Field mustard cytosol 92.16 95.57
CDY07963 Canola extracellular 83.61 80.37
AT3G07970.1 Thale cress extracellular 82.66 79.27
CDX74019 Canola extracellular 82.19 79.18
VIT_13s0064g00760.t01 Wine grape cytosol 43.23 54.82
KRH23942 Soybean extracellular 53.44 51.14
KRH32949 Soybean extracellular 52.26 50.23
KRH39858 Soybean extracellular 52.26 49.89
KRH13966 Soybean extracellular 51.54 49.43
GSMUA_Achr10P... Banana cytosol, extracellular, nucleus 44.89 47.61
VIT_13s0064g00750.t01 Wine grape cytosol 51.07 47.15
CDX72025 Canola extracellular 47.98 46.76
HORVU0Hr1G038940.1 Barley cytosol 44.66 46.53
CDX67693 Canola extracellular 47.74 46.42
CDY14791 Canola extracellular 47.51 46.19
CDY06902 Canola extracellular 47.27 45.96
TraesCS4A01G066700.1 Wheat extracellular 46.32 45.03
GSMUA_Achr1P22940_001 Banana extracellular 47.03 44.9
PGSC0003DMT400017691 Potato extracellular 37.29 44.73
Solyc01g087280.1.1 Tomato extracellular 45.13 44.71
CDX79907 Canola extracellular 46.08 44.6
CDY48768 Canola extracellular 45.84 44.37
TraesCS4D01G243600.1 Wheat extracellular 45.61 44.34
TraesCS4B01G244300.1 Wheat extracellular 45.37 44.11
KXG39856 Sorghum extracellular 44.89 43.95
Os03t0216800-01 Rice extracellular 43.47 41.78
Zm00001d048079_P001 Maize extracellular 44.42 40.48
CDY04708 Canola plastid 24.94 37.91
CDX85471 Canola extracellular 35.87 37.19
CDY37571 Canola cytosol 32.78 36.9
CDY38648 Canola cytosol 32.07 36.1
CDY54312 Canola extracellular 38.0 36.04
CDX74418 Canola extracellular 36.1 36.02
CDY57689 Canola extracellular 38.24 36.02
CDY11585 Canola extracellular 39.91 35.97
CDY47139 Canola extracellular 39.91 35.97
CDY56952 Canola extracellular 35.87 35.87
CDY54292 Canola cytosol 37.77 35.65
CDY25786 Canola cytosol 37.53 35.43
CDY50769 Canola extracellular 28.74 35.38
CDY61868 Canola extracellular 46.08 35.34
CDY02729 Canola extracellular 35.87 35.28
CDY39404 Canola extracellular 33.25 35.09
CDY09873 Canola extracellular 36.58 35.08
CDX69569 Canola extracellular 36.34 34.85
CDY16952 Canola extracellular 35.87 34.79
CDX73440 Canola extracellular 33.02 34.75
CDY69377 Canola extracellular 33.02 34.75
CDY39399 Canola extracellular 32.54 34.25
CDX72553 Canola extracellular 32.54 33.99
CDY47032 Canola extracellular 32.54 33.99
CDX75843 Canola extracellular 36.34 33.77
CDY58462 Canola extracellular 36.1 33.55
CDY30107 Canola extracellular 36.34 33.55
CDX97704 Canola extracellular 36.34 33.55
CDX69397 Canola extracellular 32.07 33.42
CDY30105 Canola extracellular 35.63 33.41
CDY41695 Canola extracellular 34.44 33.33
CDX75239 Canola cytosol 31.83 33.0
CDX97703 Canola extracellular 35.39 32.96
CDY67535 Canola extracellular 24.23 32.8
CDX68839 Canola cytosol 31.59 32.76
CDX95284 Canola extracellular 31.35 32.67
CDY44150 Canola extracellular, golgi, plastid 38.95 32.67
CDY06100 Canola extracellular 32.78 32.32
CDY43307 Canola extracellular 35.15 31.29
CDX93644 Canola extracellular 34.92 31.14
CDX83631 Canola extracellular 34.44 30.79
CDY13645 Canola extracellular 34.2 30.64
CDX89966 Canola extracellular 35.15 30.14
CDY15246 Canola extracellular 34.92 29.94
CDY41445 Canola endoplasmic reticulum 39.43 29.86
CDX77909 Canola extracellular 34.44 29.53
CDY39884 Canola extracellular 31.12 29.44
CDY71357 Canola extracellular, vacuole 20.9 27.76
CDY54228 Canola extracellular, golgi, vacuole 34.68 27.65
CDY20612 Canola extracellular 34.44 27.31
CDY20962 Canola extracellular, golgi, vacuole 34.44 27.31
CDY37962 Canola extracellular, golgi, vacuole 34.2 27.07
CDX93397 Canola extracellular, golgi, vacuole 33.97 26.83
CDY34877 Canola extracellular, golgi 30.88 26.58
CDY47212 Canola extracellular 33.73 26.49
CDY50367 Canola extracellular, golgi 33.73 26.49
Protein Annotations
Gene3D:2.160.20.10MapMan:50.3.2GO:A0A078HDV4UniProt:A0A078HDV4EnsemblPlants:CDY35976ProteinID:CDY35976
ProteinID:CDY35976.1GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005575GO:GO:0005576
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016043GO:GO:0016787
GO:GO:0016798GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00059534001InterPro:Glyco_hydro_28InterPro:IPR012334PFAM:PF00295
ScanProsite:PS00502PANTHER:PTHR31375PANTHER:PTHR31375:SF28InterPro:PbH1InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulence
SMART:SM00710SUPFAM:SSF51126SignalP:SignalP-noTMUniParc:UPI0004EDCE23SEG:seg:
Description
BnaA05g29740DBnaA05g29740D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HDV4]
Coordinates
chrLK032364:+:263666..266226
Molecular Weight (calculated)
45817.7 Da
IEP (calculated)
9.271
GRAVY (calculated)
-0.243
Length
421 amino acids
Sequence
(BLAST)
001: MYQKTIILLT ILSASLRFCS SSYPFDPRYD QSMSPDLYLE TNHLHGHITR NNHMKNRHGY APASSPRAFN VKSFGAKANG NDDSQAFKKA WNAACSSTGT
101: VYVVVPKSRA YTLKSVKFSG PCKSSLIVFK IYGKIEAWKD PSAYKERRLW IVFEAVNNLR VEGGGRIDGN GNKWWPNSCK INPNLPCLGA PTAVTFVECK
201: NLMDCENVKA LNLMVTSPGN SPNTDGIHVT GTRNILIQDS IIRTGDDCIS IVSGSENVRA TGITCGPGHG ISIGSLGANN SEAYVSNVVV NKATLIGTTN
301: GVRIKTWQGG HGVAKNIIFQ DIIMKNVTNP IIINQDYCDR VESCPQQKSA VQVSNVLYKN IQGTSSRPVA VKFECSRSIP CQGISMQNVK LVDQTQQDVV
401: STASCSNVKL DTKGHVSPIC T
Best Arabidopsis Sequence Match ( AT3G07970.1 )
(BLAST)
001: MYEKIIILSV FLLTFLPSCF SSYPFNHRDD LFMSSNVYYE TNRQHQHGHN TRNSHLKNRH GYAPRSSPRS FNVNTFGAKA NGNDDSKAFM KAWEAACSST
101: GIVYIVAPKN RDYMLKAVTF SGPCKSSLII FKIYGRIEAW ENPSDYKERR HWIVFENVNN LRVEGGGRID GNGHIWWPKS CKINPQLPCL GAPTAVTFVE
201: CNNLRVSNIR LENAQQMHLT FQDCKNVKAL NLMVTSPADS PNTDGIHVSG TQNILIQDSI VRTGDDCISI VSGSENVRAT GITCGPGHGI SIGSLGEDNS
301: EAYVSNVVVN KATLIGTTNG VRIKTWQGGH GMAKNIIFQD IIMKNVTNPI IINQDYCDRV EACPEQKSAV QVSNVLYKNI QGTSSRPIAV KFVCSKNIPC
401: RGISMQNVKL VDQTQQDVSK ASCSNVKLDT RGNVSPLCT
Arabidopsis Description
QRT2Polygalacturonase QRT2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SFB7]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.