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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY47032 Canola extracellular 96.53 96.53
AT4G35670.1 Thale cress extracellular 70.72 72.33
CDY50769 Canola extracellular 49.38 58.19
CDY39399 Canola extracellular 57.32 57.75
CDY39404 Canola extracellular 57.07 57.64
CDY69377 Canola extracellular 55.83 56.25
CDX73440 Canola extracellular 55.34 55.75
PGSC0003DMT400056828 Potato extracellular 43.18 43.72
PGSC0003DMT400008955 Potato extracellular 36.97 42.82
CDX85471 Canola extracellular 42.18 41.87
CDX68839 Canola cytosol 40.45 40.15
CDX75239 Canola cytosol 40.45 40.15
CDY58462 Canola extracellular 44.66 39.74
CDX75843 Canola extracellular 44.66 39.74
CDX97704 Canola extracellular 44.91 39.69
CDY30105 Canola extracellular 44.17 39.64
CDY30107 Canola extracellular 44.42 39.25
CDY02729 Canola extracellular 41.69 39.25
CDX97703 Canola extracellular 43.67 38.94
TraesCS2B01G423400.1 Wheat plastid 33.5 38.46
CDY39884 Canola extracellular 42.43 38.43
TraesCS2B01G423300.1 Wheat extracellular 37.47 37.66
TraesCS2A01G405100.1 Wheat extracellular 38.96 37.65
CDY16952 Canola extracellular 40.45 37.56
CDY56952 Canola extracellular 38.96 37.29
TraesCS2D01G402100.1 Wheat extracellular 37.47 37.28
TraesCS2A01G405300.1 Wheat extracellular, nucleus 37.47 37.28
HORVU2Hr1G096130.1 Barley extracellular 37.47 37.28
KRH05150 Soybean extracellular 24.81 37.17
CDX69397 Canola extracellular 37.22 37.13
TraesCS2A01G405600.1 Wheat extracellular 29.28 36.99
CDX74418 Canola extracellular 38.71 36.97
TraesCS2D01G402300.1 Wheat extracellular 30.52 36.94
KXG26899 Sorghum extracellular 38.46 36.9
TraesCS2D01G402200.1 Wheat extracellular 35.73 36.83
GSMUA_Achr11P... Banana extracellular 37.97 36.78
GSMUA_Achr4P13200_001 Banana extracellular 38.46 36.73
GSMUA_Achr9P22320_001 Banana extracellular 37.22 36.32
TraesCS2B01G423200.1 Wheat extracellular 38.21 36.24
TraesCS2D01G402000.1 Wheat extracellular 38.46 36.22
CDY37571 Canola cytosol 33.25 35.83
CDY38648 Canola cytosol 33.0 35.56
CDY04708 Canola plastid 23.82 34.66
CDX79907 Canola extracellular 37.22 34.48
CDY14791 Canola extracellular 36.48 33.95
CDY48768 Canola extracellular 36.48 33.79
CDY06902 Canola extracellular 36.23 33.72
CDX67693 Canola extracellular 35.98 33.49
CDX72025 Canola extracellular 35.73 33.33
CDY09873 Canola extracellular 35.73 32.8
CDX69569 Canola extracellular 35.48 32.57
CDY28005 Canola extracellular 33.99 32.54
CDY35976 Canola extracellular 33.99 32.54
CDX74019 Canola extracellular 34.49 31.81
CDY54312 Canola extracellular 34.99 31.76
CDY07963 Canola extracellular 34.49 31.74
CDY54292 Canola cytosol 34.99 31.61
CDY25786 Canola cytosol 34.99 31.61
CDY57689 Canola extracellular 34.99 31.54
CDY41695 Canola extracellular 33.99 31.49
CDY11585 Canola extracellular 35.98 31.05
Zm00001d039668_P001 Maize plastid 33.5 30.89
CDY47139 Canola extracellular 35.73 30.84
CDX95284 Canola extracellular 30.52 30.45
CDY44150 Canola extracellular, golgi, plastid 36.72 29.48
CDY67535 Canola extracellular 22.58 29.26
CDX83631 Canola extracellular 33.99 29.09
CDY71357 Canola extracellular, vacuole 22.83 29.02
Os01t0172900-00 Rice nucleus 21.09 28.81
CDY13645 Canola extracellular 33.5 28.72
CDY15246 Canola extracellular 33.99 27.9
CDX77909 Canola extracellular 33.99 27.9
CDX89966 Canola extracellular 33.99 27.9
CDY20962 Canola extracellular, golgi, vacuole 36.23 27.5
CDY54228 Canola extracellular, golgi, vacuole 35.98 27.46
CDY34877 Canola extracellular, golgi 33.25 27.4
CDY20612 Canola extracellular 35.98 27.31
CDY37962 Canola extracellular, golgi, vacuole 35.48 26.88
CDX93644 Canola extracellular 31.27 26.69
CDX93397 Canola extracellular, golgi, vacuole 35.24 26.64
CDY43307 Canola extracellular 31.27 26.64
CDY50367 Canola extracellular, golgi 34.99 26.31
CDY47212 Canola extracellular 34.99 26.31
CDY41445 Canola endoplasmic reticulum 36.23 26.26
CDY61868 Canola extracellular 35.24 25.87
CDY06100 Canola extracellular 24.32 22.95
GSMUA_Achr4P06370_001 Banana extracellular 41.44 22.15
Protein Annotations
Gene3D:2.160.20.10MapMan:50.3.2GO:A0A078CC65EnsemblPlants:CDX72553ProteinID:CDX72553ProteinID:CDX72553.1
GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016043GO:GO:0016787GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00100090001InterPro:Glyco_hydro_28
InterPro:IPR012334PFAM:PF00295ScanProsite:PS00502PANTHER:PTHR31375PANTHER:PTHR31375:SF42InterPro:PbH1
InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00710SUPFAM:SSF51126TMHMM:TMhelixUniParc:UPI0004EEFB24
SEG:seg:::::
Description
BnaC07g45750D
Coordinates
chrLK031796:+:1830026..1832676
Molecular Weight (calculated)
43285.6 Da
IEP (calculated)
7.276
GRAVY (calculated)
-0.006
Length
403 amino acids
Sequence
(BLAST)
001: MVHIKLILLF FEIILRFSVS VIFLCFGLVN SQNYSVLDFD ATGDGQTDDS NAFVKTWNAA CGGGGDISIL LIPAGRTFLI QPIVFNGPCR SSNTKVQLEG
101: VIIAPSNKEA WSNPNSRMWI KFSAVLGLVI VGSGTINGRG SSFWEQNLKA SQRPTSLHIS KCDNLSISGI TSVDSPKNHI SIAACTNVAI SNVRLFAPED
201: SPNTDGIDIS RSTNVNIFDS TIQTGDDCIA INTGNTNINI TRINCGPGHG ISVGSLGVNG GSAAVSDVQV TQCTFNQTMN GARIKTWPGG QGYARNISFE
301: NITLINAKNP IIIDQQYIDK GRVYSAEKSA VAISNIKFID FLGTTSKKNA IKIDCSATTR CKDVLMNGIN ITMADGKQPR VDCKNVDGKS EDTILTHDCF
401: ENI
Best Arabidopsis Sequence Match ( AT4G35670.1 )
(BLAST)
001: MKTILDISIL INFLCFGIVY GKNYNVLNFD AKGDGQTDDS EAFLQAWTAA CGGDGDIKTL LIPSGKTFLL QPTVFQGPCK SSSIKVQLDG TIVAPSDKFA
101: WSDPISRMWI KFSTVSGLII VGSGTIDSRG SSFWELNLKA SQRPTALHIS KCDNLRINGI TSIDSPKNHI SIKTCNTVAI SNINLFAPET SPNTDGIDIS
201: DSTNINIFDS TIQTGDDCIA INSGSSNINI TGINCGPGHG ISVGSLGAGG AEAKVSDVQV THCTFNQTTN GARIKTWLGG QGYARNISFT DITLVNTKNP
301: IIIDQHYIDK GRLTEESAVA ISNVKFVDFR GTSSNKNAIT LKCSETTHCV DVVMDGIDIT MANGGKPKVN CQYVDGESSD TDLMRDCFKN NTSS
Arabidopsis Description
Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JN47]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.