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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G402000.1 Wheat extracellular 95.06 94.39
TraesCS2A01G405100.1 Wheat extracellular 92.47 94.24
TraesCS2B01G423400.1 Wheat plastid 66.35 80.34
TraesCS2B01G423300.1 Wheat extracellular 72.94 77.31
KXG26899 Sorghum extracellular 57.88 58.57
KRH14715 Soybean cytosol, extracellular, nucleus, plastid 34.35 42.07
GSMUA_Achr11P... Banana extracellular 41.18 42.07
KRH23786 Soybean cytosol, extracellular, nucleus, plastid 35.06 41.39
TraesCS1B01G083700.1 Wheat extracellular 28.71 40.4
CDY50769 Canola extracellular 32.24 40.06
AT4G35670.1 Thale cress extracellular 36.94 39.85
TraesCS5B01G468700.1 Wheat extracellular 38.35 39.76
CDY69377 Canola extracellular 37.41 39.75
AT5G44840.1 Thale cress extracellular 36.47 39.64
VIT_09s0096g00850.t01 Wine grape cytoskeleton, cytosol, peroxisome 34.59 39.62
CDX73440 Canola extracellular 37.18 39.5
CDY39404 Canola extracellular 36.94 39.35
Bra025099.1-P Field mustard extracellular 36.94 39.25
TraesCS5B01G469000.1 Wheat extracellular 37.41 39.16
AT5G44830.1 Thale cress extracellular 30.59 39.16
Bra025103.1-P Field mustard extracellular 36.47 38.75
CDY39399 Canola extracellular 36.24 38.5
CDY47032 Canola extracellular 36.47 38.46
KRG88958 Soybean extracellular 32.0 38.31
VIT_09s0002g06610.t01 Wine grape extracellular 35.06 38.3
KRH48978 Soybean extracellular 26.82 38.26
CDX72553 Canola extracellular 36.24 38.21
KRH66273 Soybean extracellular 27.76 38.06
KRH66276 Soybean extracellular 31.53 37.75
TraesCS7B01G067800.1 Wheat extracellular 37.18 37.62
Solyc03g116580.2.1 Tomato extracellular 38.59 37.53
KRH05150 Soybean extracellular 23.53 37.17
VIT_09s0002g06650.t01 Wine grape extracellular 35.29 37.13
VIT_09s0002g06580.t01 Wine grape cytosol 34.12 37.08
TraesCS5B01G468900.1 Wheat extracellular 36.47 36.99
TraesCS3B01G148500.1 Wheat extracellular 34.82 36.91
TraesCS1B01G142700.1 Wheat plastid 38.12 36.82
Solyc08g060970.2.1 Tomato nucleus 33.88 36.27
TraesCS4B01G244300.1 Wheat extracellular 36.94 36.26
TraesCS3B01G148600.1 Wheat extracellular 35.06 36.16
TraesCS1B01G382200.2 Wheat extracellular 35.06 35.99
KRH23567 Soybean extracellular 33.88 35.91
PGSC0003DMT400056828 Potato extracellular 33.41 35.68
PGSC0003DMT400008955 Potato extracellular 28.94 35.34
CDX85471 Canola extracellular 33.41 34.98
Bra001605.1-P Field mustard extracellular 36.94 34.73
CDX75843 Canola extracellular 36.94 34.66
KRH09740 Soybean extracellular 34.59 34.59
KRH66305 Soybean extracellular 31.29 34.55
CDY58462 Canola extracellular 36.47 34.22
Bra011341.1-P Field mustard cytosol 31.53 34.1
AT5G17200.1 Thale cress extracellular 33.65 33.97
Bra008572.1-P Field mustard extracellular 34.59 33.87
CDY30105 Canola extracellular 35.76 33.85
TraesCS1B01G382700.1 Wheat extracellular 33.18 33.65
Bra027211.1-P Field mustard extracellular 35.53 33.48
CDY02729 Canola extracellular 33.65 33.41
CDY16952 Canola extracellular 34.12 33.41
CDX97703 Canola extracellular 35.53 33.41
Bra023600.1-P Field mustard extracellular 33.41 33.18
CDX69397 Canola extracellular 31.53 33.17
CDY30107 Canola extracellular 35.53 33.11
CDX97704 Canola extracellular 35.53 33.11
CDX68839 Canola cytosol 31.53 33.0
CDX75239 Canola cytosol 31.53 33.0
AT5G27530.1 Thale cress cytosol 35.53 32.97
Bra027210.1-P Field mustard extracellular 35.29 32.89
AT3G15720.1 Thale cress extracellular 35.29 32.89
TraesCS1B01G382800.1 Wheat extracellular 32.71 32.03
AT4G32370.1 Thale cress extracellular 24.94 30.99
TraesCS6B01G118000.2 Wheat extracellular, golgi, vacuole 38.35 30.87
TraesCS3B01G020300.1 Wheat extracellular 32.0 30.7
TraesCS1B01G322500.1 Wheat extracellular 34.82 30.58
TraesCS1B01G448100.1 Wheat extracellular 37.18 29.81
CDY39884 Canola extracellular 31.06 29.66
TraesCS7B01G230600.1 Wheat extracellular 33.88 29.57
TraesCS3B01G258600.2 Wheat extracellular 36.71 29.05
Bra040077.1-P Field mustard extracellular 24.47 28.49
AT4G32380.1 Thale cress extracellular 29.88 28.04
AT4G32375.1 Thale cress extracellular 23.76 23.88
Protein Annotations
Gene3D:2.160.20.10MapMan:50.3.2GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005975
GO:GO:0008150GO:GO:0008152GO:GO:0016787InterPro:Glyco_hydro_28InterPro:IPR012334PFAM:PF00295
ScanProsite:PS00502PANTHER:PTHR31375PANTHER:PTHR31375:SF45InterPro:PbH1InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulence
SMART:SM00710SUPFAM:SSF51126SignalP:SignalP-noTMTMHMM:TMhelixEnsemblPlantsGene:TraesCS2B01G423200EnsemblPlants:TraesCS2B01G423200.1
SEG:seg:::::
Description
No Description!
Coordinates
chr2B:+:608539868..608542004
Molecular Weight (calculated)
44245.9 Da
IEP (calculated)
5.147
GRAVY (calculated)
-0.013
Length
425 amino acids
Sequence
(BLAST)
001: MGIIGILRTA ILLLVSLAWC SVLVAAAGGV DGVLNVQDYG ALGDGTTDDT KAFVDAWAAA CGATGSSATL HVPAAKSFLV GLTRFSGPCA STRITVQVLG
101: TITAPPASAW SEKKNYWLMF YQVDGLTVTG NSTGLLDGSG KTWWSDKCKH GDDDCVTKAP TALLVMNCTD VELSQFSSKD SPQMHIGLSM SGKVNVTQLT
201: ITAPEDSPNT DGVHVDRSED VHITGSTIGT GDDCISIGPG SRFVTVDRIV CGPGHGVSVG SLGRDGANES VEYIDVRNVQ FINTTNGARI KTWKGGKGYA
301: KSISFTNINF TNVDHPVIIN QFYEDRQDVS NTGAVALSNI TYTNLNGTST GKTAVDFDCS KNGSCMDIHV NTVAITAADG GATVARCQNA EVDTSGFVYP
401: KIPCVANAAS PSPANAPSPS PRLSS
Best Arabidopsis Sequence Match ( AT5G44840.1 )
(BLAST)
001: MEIILRGVFL LTLLHSILVN GQIYDVLEFG ADGNGITDDS KAFVKAWSAM CGSGGNSKTF IIPSNKTFLL QPLTFQGPCK SPSVQVKFDG KIVAPINKAA
101: WSDYKLFRWV SFKEIIGLTV NGSGTIHGRG SSFWKQGLPA SKRPTQLHFQ RCNDLMITGI TSFNSPKNHI SISECKRVKI TKIKLVAPHD SPNTDGINIS
201: ESSDVDIYDT VIGTGDDCVA INSGSMNINI ARMNCGPGHG ISVGSVGRDG EESIVENVQV TNCTFIRTDN GARIKTWPNG KGYAKNILFK SLTFRETKNP
301: IIIDQNYVDK GRLDVEESAV AISNVTFTDL RGTSKLDEII KIDCSKVTYC KDIVLDKIDI ATVDGNKPIV ECSNVYGKSI NANEANGCFK T
Arabidopsis Description
Pectin lyase-like superfamily protein [Source:TAIR;Acc:AT5G44840]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.