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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytoskeleton, cytosol

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • cytosol 1
  • mitochondrion 1
  • cytoskeleton 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytoskeleton, cytosol, peroxisome
Any Predictor:cytoskeleton, cytosol, mitochondrion, peroxisome, secretory
BaCelLo:secretory
EpiLoc:extracellular
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH23567 Soybean extracellular 50.13 46.38
VIT_09s0002g06650.t01 Wine grape extracellular 47.71 43.81
KRH09740 Soybean extracellular 50.13 43.76
VIT_09s0002g06610.t01 Wine grape extracellular 44.47 42.42
VIT_09s0002g06580.t01 Wine grape cytosol 42.59 40.41
VIT_17s0000g05670.t01 Wine grape extracellular 41.24 38.93
Solyc03g116580.2.1 Tomato extracellular 45.28 38.44
GSMUA_Achr4P13200_001 Banana extracellular 43.67 38.39
PGSC0003DMT400056828 Potato extracellular 40.7 37.94
VIT_13s0064g00760.t01 Wine grape cytosol 33.69 37.65
TraesCS2B01G423400.1 Wheat plastid 35.58 37.61
TraesCS2D01G402100.1 Wheat extracellular 40.16 36.79
TraesCS2D01G402200.1 Wheat extracellular 38.54 36.57
TraesCS2A01G405300.1 Wheat extracellular, nucleus 39.89 36.54
PGSC0003DMT400008955 Potato extracellular 33.96 36.21
HORVU2Hr1G096130.1 Barley extracellular 39.35 36.05
VIT_17s0000g05660.t01 Wine grape extracellular 37.47 35.92
TraesCS2B01G423300.1 Wheat extracellular 38.81 35.91
TraesCS2A01G405100.1 Wheat extracellular 39.89 35.49
KXG26899 Sorghum extracellular 40.16 35.48
TraesCS2A01G405600.1 Wheat extracellular 29.92 34.8
GSMUA_Achr11P... Banana extracellular 38.81 34.62
TraesCS2B01G423200.1 Wheat extracellular 39.62 34.59
TraesCS2D01G402000.1 Wheat extracellular 39.89 34.58
TraesCS2D01G402300.1 Wheat extracellular 31.0 34.53
GSMUA_Achr9P22320_001 Banana extracellular 38.27 34.38
VIT_08s0007g07760.t01 Wine grape extracellular 39.89 34.02
VIT_08s0007g08330.t01 Wine grape extracellular 40.7 34.01
VIT_08s0007g07750.t01 Wine grape extracellular 40.43 33.94
VIT_08s0007g07780.t01 Wine grape extracellular 39.62 33.87
VIT_08s0007g07770.t01 Wine grape extracellular 39.35 33.03
VIT_09s0002g06380.t01 Wine grape cytosol 36.12 32.37
VIT_13s0064g00750.t01 Wine grape cytosol 39.62 32.24
Zm00001d039668_P001 Maize plastid 37.74 32.04
VIT_14s0060g00620.t01 Wine grape extracellular 38.54 30.82
VIT_14s0066g01060.t01 Wine grape extracellular 38.81 29.81
VIT_05s0020g00420.t01 Wine grape extracellular 37.74 29.35
VIT_07s0005g02090.t01 Wine grape extracellular 36.66 29.25
VIT_01s0127g00120.t01 Wine grape extracellular 37.74 29.23
Os01t0172900-00 Rice nucleus 22.37 28.14
VIT_01s0127g00400.t01 Wine grape extracellular, mitochondrion, plastid 37.74 27.03
GSMUA_Achr4P06370_001 Banana extracellular 39.62 19.5
Protein Annotations
EntrezGene:100251699wikigene:100251699Gene3D:2.160.20.10MapMan:50.3.2ProteinID:CBI33426ProteinID:CBI33426.3
UniProt:D7TSF4EMBL:FN596243GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005575
GO:GO:0005576GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016043
GO:GO:0016787GO:GO:0016798GO:GO:0071555InterPro:Glyco_hydro_28InterPro:IPR012334EntrezGene:LOC100251699
wikigene:LOC100251699PFAM:PF00295ScanProsite:PS00502PANTHER:PTHR31375PANTHER:PTHR31375:SF42InterPro:PbH1
InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00710SUPFAM:SSF51126UniParc:UPI0001BE4019ArrayExpress:VIT_09s0096g00850
EnsemblPlantsGene:VIT_09s0096g00850EnsemblPlants:VIT_09s0096g00850.t01RefSeq:XP_003632896RefSeq:XP_003632896.1::
Description
No Description!
Coordinates
chr9:+:12518294..12520356
Molecular Weight (calculated)
39455.3 Da
IEP (calculated)
5.102
GRAVY (calculated)
-0.111
Length
371 amino acids
Sequence
(BLAST)
001: MNYGAVGDGK TDDSQAFLKA WNEACNVQQQ RATLNVPART FLLNPIEFSG PCVPTSIEFQ VAGKIIASTN KSLFDNNHWI LFSYVKGLTL TGSGTIDGQG
101: AGSWQDRTGV AISHVLGQAL KFYTCPNLVL QGLTHINPQK AHIILTKCDG ANINSITITA PEDAPNTDGI DIASSNHVQV QNSKIGTGDD CIAISARCSF
201: INITGVTCGP GHGISIGSLG DPGSGDFDTV SEVHVRSCNF TGTNTTGIRI KTWQGGQGEV KKITYEDIMF DNVRYPIVID QFYCPHNVCK NNTGTSAVAI
301: SDVSYTGIIG TSSGDEVMSL NCGTESSCNN IVLDDVHLKT SDPTKTAFVR CVNFNGIASN VEPSLDQCLN S
Best Arabidopsis Sequence Match ( AT5G27530.1 )
(BLAST)
001: MEDMVTIQKN GDIPAFVRVT TQWHGLMSFP ETILRISILI NFICFGLVNG QIYNVLKFGA EGDGQTDDSN AFLQAWNATC GGEENINTLF IPSGKTYLLQ
101: PIEFKGPCKS TSIKLQLDGI IVAPSNITSW SNPKSQTWIS FSGVPGLMID GSGTINGRGS SFWEALHICN CNNLTINGIT SIDSPKSHIS IKNCHYVAIS
201: KINILAPENS PNTDGIDISY STNVNIFDST IQTGDDCIAI NTGSSSINIT QVNCGPGHGI SVGSLGADGE NAAVSDVYVT QCTFNKTTNG ARIKTWQGGQ
301: GYARNISFEN ITLINVQNPI IIDQQYTDKV LLDATKDSAV AISSVKYVGF QGTTLNEDAI MLKCSAITYC KDMVIDDIEV TMENGEKPKV ECENVEGESS
401: DNDLMRECFN SNSTFSGGSV GGFGWVYECP CVRMGGPNWR FSSRISRTFL DPSSFHVH
Arabidopsis Description
Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4K4C2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.