Factsheet for VIT_08s0007g07770.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_08s0007g07750.t01	Wine grape	extracellular	96.38	96.38
VIT_08s0007g07780.t01	Wine grape	extracellular	93.67	95.39
VIT_08s0007g07760.t01	Wine grape	extracellular	93.21	94.71
VIT_08s0007g08330.t01	Wine grape	extracellular	83.48	83.11
KRH71979	Soybean	extracellular	58.37	60.28
Solyc04g015530.1.1	Tomato	cytosol	52.26	58.93
VIT_13s0064g00760.t01	Wine grape	cytosol	43.67	58.13
AT2G41850.1	Thale cress	extracellular	54.07	55.2
KRH66955	Soybean	extracellular	57.92	55.17
KRH33163	Soybean	extracellular, plastid	58.6	54.3
AT3G57510.1	Thale cress	extracellular	52.94	54.29
CDX72025	Canola	extracellular	52.26	53.47
CDY48768	Canola	extracellular	52.49	53.33
CDX79907	Canola	extracellular	52.49	53.33
CDY14791	Canola	extracellular	52.04	53.12
Bra004655.1-P	Field mustard	extracellular	51.36	53.04
PGSC0003DMT400070039	Potato	cytosol	49.09	52.93
Bra016911.1-P	Field mustard	extracellular	51.81	52.89
Bra003286.1-P	Field mustard	extracellular	51.81	52.89
CDX67693	Canola	extracellular	51.81	52.89
CDY06902	Canola	extracellular	51.58	52.66
Bra007332.1-P	Field mustard	extracellular	51.36	52.55
Solyc10g080210.1.1	Tomato	extracellular	54.07	52.3
VIT_13s0064g00750.t01	Wine grape	cytosol	53.85	52.19
GSMUA_Achr10P...	Banana	cytosol, extracellular, nucleus	46.38	51.64
Bra016912.1-P	Field mustard	extracellular, nucleus, peroxisome	51.13	50.45
KRG95273	Soybean	extracellular	57.92	48.95
HORVU0Hr1G038940.1	Barley	cytosol	43.67	47.77
GSMUA_Achr1P22940_001	Banana	extracellular	47.06	47.17
TraesCS4A01G066700.1	Wheat	extracellular	45.02	45.96
Os03t0216800-01	Rice	extracellular	45.02	45.43
TraesCS4B01G244300.1	Wheat	extracellular	44.34	45.27
TraesCS4D01G243600.1	Wheat	extracellular	44.34	45.27
KXG39856	Sorghum	extracellular	43.67	44.88
CDY61868	Canola	extracellular	50.45	40.62
VIT_09s0002g06380.t01	Wine grape	cytosol	37.78	40.34
Zm00001d048079_P001	Maize	extracellular	41.86	40.04
VIT_09s0002g06650.t01	Wine grape	extracellular	36.2	39.6
VIT_09s0096g00850.t01	Wine grape	cytoskeleton, cytosol, peroxisome	33.03	39.35
CDY06100	Canola	extracellular	37.33	38.64
VIT_17s0000g05670.t01	Wine grape	extracellular	33.26	37.4
VIT_17s0000g05660.t01	Wine grape	extracellular	32.58	37.21
VIT_09s0002g06610.t01	Wine grape	extracellular	32.58	37.02
VIT_09s0002g06580.t01	Wine grape	cytosol	32.35	36.57
VIT_14s0060g00620.t01	Wine grape	extracellular	36.88	35.13
VIT_07s0005g02090.t01	Wine grape	extracellular	36.2	34.41
VIT_14s0066g01060.t01	Wine grape	extracellular	37.33	34.16
VIT_05s0020g00420.t01	Wine grape	extracellular	35.97	33.33
VIT_01s0127g00120.t01	Wine grape	extracellular	33.03	30.48
VIT_01s0127g00400.t01	Wine grape	extracellular, mitochondrion, plastid	34.62	29.54

Protein Annotations

EntrezGene:100257239	wikigene:100257239	Gene3D:2.160.20.10	MapMan:21.3.5.1.1	ProteinID:CBI29905	ProteinID:CBI29905.3
UniProt:D7TI29	EMBL:FN595991	GO:GO:0003674	GO:GO:0003824	GO:GO:0004650	GO:GO:0005575
GO:GO:0005576	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016043	GO:GO:0016787	GO:GO:0016798	GO:GO:0071555	InterPro:Glyco_hydro_28
InterPro:IPR012334	EntrezGene:LOC100257239	wikigene:LOC100257239	PFAM:PF00295	ScanProsite:PS00502	PANTHER:PTHR31375
PANTHER:PTHR31375:SF3	InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SMART:SM00710	SUPFAM:SSF51126
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00015CA9E5	ArrayExpress:VIT_08s0007g07770	EnsemblPlantsGene:VIT_08s0007g07770	EnsemblPlants:VIT_08s0007g07770.t01
unigene:Vvi.7984	unigene:Vvi.9391	RefSeq:XP_002282772	RefSeq:XP_002282772.1	SEG:seg	:

Description

No Description!

Coordinates

chr8:-:21217813..21220330

Molecular Weight (calculated)

47348.5 Da

IEP (calculated)

5.450

GRAVY (calculated)

-0.293

Length

442 amino acids

Sequence
(BLAST)

001: MSLQRRFIPF LIVFLLSFPC YYGLQGNPPY DYLDDAYGYD SSRAYESWPW RKFGSKIMGS KRICKVGRSL ASVKTVSVND YEAKGDGSDA TEAFKKAWEA
101: ACSSQGSVLV VPKNKNYLLK PITFEGPCKS SITVQIYGTV QASADRSAYS NDMTRWLVFE NVQNLAVQGG GTINGNGKTW WENSCKVNDD LPCKDAPTAL
201: TFYNCKNLVV KNLKIQNAQQ MHVSFEKCVG VQASGLTVTA PGDSPNTDGI HVTDTQNIQI SSSVIGTGDD CISIVSGTQN LQATGITCGP GHGISIGSLG
301: SGNSEAHVSD ITVNGATLSG TTNGVRIKTW QGGSGSASNI KFQNIEMHDV DNPIIINQKY CDDDKPCESE SQAVQVQNVL YQNIKGTSSS SEAIQLDCSS
401: KFPCQGIVLQ DIDIETGGGK AATAVCNDAK VTEKGDVSPS CT

Best Arabidopsis Sequence Match ( AT3G57510.1 )
(BLAST)

001: MARCCRHLAV FLCVLLMLSL CKALSSNVDD GYGHEDGSFE SDSLLKLNND DVLSLISSDE TTLEASTVSV SNFGAKGDGK TDDTQAFKKA WKKACSTNGV
101: TTFLVPKGKT YLLKSTRFRG PCKSLRNFQI LGTLSASTKR SDYKDKNHWL ILEDVNNLSI DGGSTGIING NGKTWWQNSC KIDKSKPCTK APTALTLYNL
201: KNLNVKNLRV KNAQQIQISI EKCNKVEVSN VEITAPGDSP NTDGIHITNT QNIRVSNSDI GTGDDCISIE DGTQNLQIFD LTCGPGHGIS IGSLGDDNSK
301: AYVSGINVDG AKFSESDNGV RIKTYQGGSG TAKNIKFQNI RMENVKNPII IDQDYCDKDK CEDQESAVQV KNVVYKNISG TSATDVAITL NCSEKYPCQG
401: IVLENVKIKG GTASCKNANV KNQGTVSPKC S

Arabidopsis Description

ADPG1Polygalacturonase ADPG1 [Source:UniProtKB/Swiss-Prot;Acc:O23147]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.