Factsheet for HORVU0Hr1G038940.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G243600.1	Wheat	extracellular	93.81	87.53
TraesCS4B01G244300.1	Wheat	extracellular	93.56	87.3
TraesCS4A01G066700.1	Wheat	extracellular	92.08	85.91
Os03t0216800-01	Rice	extracellular	75.99	70.09
KXG39856	Sorghum	extracellular	73.02	68.6
Zm00001d048079_P001	Maize	extracellular	67.33	58.87
VIT_13s0064g00760.t01	Wine grape	cytosol	40.84	49.7
KRH23942	Soybean	extracellular	51.24	47.05
Bra029690.1-P	Field mustard	cytosol	47.28	47.04
GSMUA_Achr1P22940_001	Banana	extracellular	51.24	46.94
KRH71979	Soybean	extracellular	49.26	46.5
KRH32949	Soybean	extracellular	50.25	46.35
KRH39858	Soybean	extracellular	50.49	46.26
KRH13966	Soybean	extracellular	49.26	45.33
Solyc04g015530.1.1	Tomato	cytosol	43.81	45.15
VIT_08s0007g08330.t01	Wine grape	extracellular	49.51	45.05
HORVU7Hr1G034150.1	Barley	extracellular	46.04	44.93
CDY28005	Canola	extracellular	46.53	44.66
CDY35976	Canola	extracellular	46.53	44.66
VIT_08s0007g07750.t01	Wine grape	extracellular	48.51	44.34
HORVU1Hr1G013520.1	Barley	cytosol	43.07	44.27
CDX74019	Canola	extracellular	47.77	44.16
HORVU5Hr1G109970.1	Barley	extracellular	45.3	44.1
Bra001279.1-P	Field mustard	extracellular	47.52	43.94
VIT_08s0007g07760.t01	Wine grape	extracellular	47.28	43.91
VIT_08s0007g07770.t01	Wine grape	extracellular	47.77	43.67
Bra016911.1-P	Field mustard	extracellular	46.78	43.65
CDY07963	Canola	extracellular	47.28	43.61
CDY14791	Canola	extracellular	46.53	43.42
CDY06902	Canola	extracellular	46.53	43.42
PGSC0003DMT400017691	Potato	extracellular	37.62	43.3
AT3G07970.1	Thale cress	extracellular	46.53	42.82
VIT_08s0007g07780.t01	Wine grape	extracellular	45.79	42.63
CDY48768	Canola	extracellular	45.54	42.3
Bra016912.1-P	Field mustard	extracellular, nucleus, peroxisome	46.78	42.19
VIT_13s0064g00750.t01	Wine grape	cytosol	47.52	42.11
CDX79907	Canola	extracellular	45.3	42.07
Bra004655.1-P	Field mustard	extracellular	44.55	42.06
AT2G41850.1	Thale cress	extracellular	44.8	41.8
HORVU5Hr1G109980.2	Barley	extracellular, plastid	46.29	41.65
Solyc01g087280.1.1	Tomato	extracellular	43.81	41.65
CDX72025	Canola	extracellular	43.81	40.97
HORVU3Hr1G024420.1	Barley	cytosol	22.52	40.81
Bra007332.1-P	Field mustard	extracellular	43.56	40.74
KRH33163	Soybean	extracellular, plastid	47.77	40.46
Bra003286.1-P	Field mustard	extracellular	43.32	40.42
CDX67693	Canola	extracellular	43.32	40.42
KRH66955	Soybean	extracellular	46.04	40.09
Solyc10g080210.1.1	Tomato	extracellular	45.3	40.04
PGSC0003DMT400070039	Potato	cytosol	40.35	39.76
AT3G57510.1	Thale cress	extracellular	42.33	39.68
HORVU2Hr1G096130.1	Barley	extracellular	37.13	37.04
KRG95273	Soybean	extracellular	45.54	35.18
HORVU3Hr1G031180.1	Barley	extracellular	12.13	34.75
HORVU7Hr1G078960.2	Barley	extracellular	39.6	32.72
HORVU1Hr1G079130.2	Barley	extracellular	34.65	32.26
HORVU1Hr1G067840.1	Barley	extracellular, plastid	37.13	31.51
CDY61868	Canola	extracellular	41.83	30.78
HORVU3Hr1G006180.2	Barley	extracellular	32.18	30.23
HORVU6Hr1G015390.2	Barley	extracellular, golgi	38.61	29.55
HORVU1Hr1G079140.6	Barley	plastid	35.64	29.45
HORVU3Hr1G056270.10	Barley	extracellular	38.12	28.95
CDY06100	Canola	extracellular	28.71	27.17
HORVU1Hr1G091430.5	Barley	extracellular	35.15	25.63

Protein Annotations

Gene3D:2.160.20.10	MapMan:50.3.2	UniProt:A0A287ECN7	GO:GO:0003674	GO:GO:0003824	GO:GO:0004650
GO:GO:0005575	GO:GO:0005576	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016043	GO:GO:0016787	GO:GO:0016798	GO:GO:0071555	InterPro:Glyco_hydro_28	EnsemblPlantsGene:HORVU0Hr1G038940
EnsemblPlants:HORVU0Hr1G038940.1	InterPro:IPR012334	PFAM:PF00295	ScanProsite:PS00502	PANTHER:PTHR31375	PANTHER:PTHR31375:SF95
InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SMART:SM00710	SUPFAM:SSF51126	UniParc:UPI000B4733B6

Description

No Description!

Coordinates

chrchrUn:-:247764900..247766968

Molecular Weight (calculated)

43069.9 Da

IEP (calculated)

5.572

GRAVY (calculated)

-0.086

Length

404 amino acids

Sequence
(BLAST)

001: IALPPEAAYG PAAESSDAGA PELSPGPPPM VFDVDDYGAS AGGDATEAFL AAWKDACNSS DDPSLFLVPE GKTYLLMPLS FSGPCRATAI TAMIRGTLEA
101: PSNRSVWLDG DRQERWITFE DVDGLHVMGG GTLNGHGQEW WVNSCKVNKS MRCVAGPTAL YFRSCNHLVV DDLEVKDSMQ MHVVIAYCWK AAVSRLFVTA
201: PGWSPNTDGI HVSNSREVSI TNCIISTGDD CISIVSGSEC VRASGIYCGP GHGISIGSLG ANKSRAHVSD VLVEKATLVG TTNGVRIKTW QGGEGSAERI
301: TFQDIKMYNV TNPIIIDQNY CDSKKPCSEQ DSAVAISGIR YNKIHGTSSS KVAVKFICSN AVHCDGIVMQ DVSLVGQGHR LTCSSVNARV ITPGFNSPYC
401: RSDM

Best Arabidopsis Sequence Match ( AT3G07970.1 )
(BLAST)

001: MYEKIIILSV FLLTFLPSCF SSYPFNHRDD LFMSSNVYYE TNRQHQHGHN TRNSHLKNRH GYAPRSSPRS FNVNTFGAKA NGNDDSKAFM KAWEAACSST
101: GIVYIVAPKN RDYMLKAVTF SGPCKSSLII FKIYGRIEAW ENPSDYKERR HWIVFENVNN LRVEGGGRID GNGHIWWPKS CKINPQLPCL GAPTAVTFVE
201: CNNLRVSNIR LENAQQMHLT FQDCKNVKAL NLMVTSPADS PNTDGIHVSG TQNILIQDSI VRTGDDCISI VSGSENVRAT GITCGPGHGI SIGSLGEDNS
301: EAYVSNVVVN KATLIGTTNG VRIKTWQGGH GMAKNIIFQD IIMKNVTNPI IINQDYCDRV EACPEQKSAV QVSNVLYKNI QGTSSRPIAV KFVCSKNIPC
401: RGISMQNVKL VDQTQQDVSK ASCSNVKLDT RGNVSPLCT

Arabidopsis Description

QRT2Polygalacturonase QRT2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SFB7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.