Factsheet for HORVU5Hr1G109980.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular

Predictor Summary:

plastid 3
extracellular 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plastid
Any Predictor:	extracellular, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	extracellular
TargetP:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G468700.1	Wheat	extracellular	83.96	91.95
TraesCS5D01G470100.1	Wheat	extracellular	82.18	90.0
TraesCS5B01G469000.1	Wheat	extracellular	81.29	89.9
TraesCS5A01G459000.1	Wheat	extracellular	81.29	89.24
HORVU5Hr1G109970.1	Barley	extracellular	66.82	72.29
EER90686	Sorghum	plastid	61.47	63.3
Zm00001d034551_P001	Maize	extracellular	60.13	61.93
Zm00001d034552_P001	Maize	extracellular	60.13	61.22
EER93240	Sorghum	extracellular	61.02	60.62
HORVU7Hr1G034150.1	Barley	extracellular	54.34	58.94
EER90681	Sorghum	extracellular	60.36	58.03
Os03t0808000-00	Rice	extracellular	59.69	58.01
Zm00001d034559_P001	Maize	extracellular	58.57	55.37
HORVU1Hr1G013520.1	Barley	cytosol	47.88	54.71
Zm00001d013032_P001	Maize	extracellular	59.24	54.62
HORVU0Hr1G038940.1	Barley	cytosol	41.65	46.29
HORVU3Hr1G024420.1	Barley	cytosol	20.94	42.15
HORVU2Hr1G096130.1	Barley	extracellular	35.63	39.51
HORVU3Hr1G031180.1	Barley	extracellular	11.8	37.59
HORVU6Hr1G015390.2	Barley	extracellular, golgi	40.53	34.47
HORVU7Hr1G078960.2	Barley	extracellular	35.63	32.72
HORVU1Hr1G079130.2	Barley	extracellular	31.63	32.72
HORVU1Hr1G067840.1	Barley	extracellular, plastid	34.3	32.35
HORVU3Hr1G056270.10	Barley	extracellular	37.42	31.58
HORVU3Hr1G006180.2	Barley	extracellular	29.84	31.16
HORVU1Hr1G079140.6	Barley	plastid	33.85	31.08
HORVU1Hr1G091430.5	Barley	extracellular	37.86	30.69

Protein Annotations

Gene3D:2.160.20.10	MapMan:21.3.5.1.1	UniProt:A0A287SPQ4	GO:GO:0003674	GO:GO:0003824	GO:GO:0004650
GO:GO:0005575	GO:GO:0005576	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016043	GO:GO:0016787	GO:GO:0016798	GO:GO:0071555	InterPro:Glyco_hydro_28	EnsemblPlantsGene:HORVU5Hr1G109980
EnsemblPlants:HORVU5Hr1G109980.2	InterPro:IPR012334	PFAM:PF00295	ScanProsite:PS00502	PANTHER:PTHR31375	PANTHER:PTHR31375:SF98
InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SMART:SM00710	SUPFAM:SSF51126	UniParc:UPI000B482380
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:631560148..631561719

Molecular Weight (calculated)

47711.8 Da

IEP (calculated)

8.306

GRAVY (calculated)

-0.151

Length

449 amino acids

Sequence
(BLAST)

001: LHHLYASPIP VLPPNTKLQT RPRTCSSTPA LRFPCLQLVH MASFMAAALL VLLLASSARA SSTPTQATQQ NVFVVDNYGA RGDGKHDDAQ PLAKAWNAAC
101: SSSRPAVLLV PEGKTYLLSP VTLSGPCKSS SVVFMIKGTL VAPRSRSAWS QKGTSRWILI QGVTGLTVSG GGTINGNGDV WWSNSCKVNR ALPCTKAPTA
201: LTFDQCNNLQ VDNLKLVNSQ QMHLSVEDCS AVQLARLSIT APGTSPNTDG IHITHSKDVQ VKDCVIKTGD DCVSVENGTH NLFVSKVVCG PGHGISIGSL
301: GDDNSRAEVS GVTIDSVQLY GTTNGARIKT WQGGSGYAKG ITFQNMIMDN VQNPIIIDQN YCDSAKPCTK SQGSAVEVSN VVFKNIRGTT VSKDAIKLSC
401: SDNVSCSDIV LENIDLKMEG GKGDTKSTCQ NAKWQESGTV IPQPCQFQN

Best Arabidopsis Sequence Match ( AT2G41850.1 )
(BLAST)

001: MARCTNLVTV FLLWALLMFS WCKASRISPN VYDHSYKRFK SDSLIKRRED ITGLRSFVRA SLRTPTTVSV SDFGAKGDGK TDDTQAFVNA WKKACSSNGA
101: VNLLVPKGNT YLLKSIQLTG PCNSILTVQI FGTLSASQKR SDYKDISKWI MFDGVNNLSV DGGDTGVVDG NGETWWQNSC KRNKAKPCTK APTALTFYNS
201: KSLIVKNLKV RNAQQIQISI EKCSNVQVSN VVVTAPADSP NTDGIHITNT QNIRVSESII GTGDDCISIE SGSQNVQIND ITCGPGHGIS IGSLGDDNSK
301: AFVSGVTVDG AKLSGTDNGV RIKTYQGGSG TASNIIFQNI QMDNVKNPII IDQDYCDKSK CTTEKSAVQV KNVVYRDISG TSASENAITF NCSKNYPCQG
401: IVLDRVNIKG GKATCTNANV VDKGAVLPQC NST

Arabidopsis Description

ADPG2Polygalacturonase ADPG2 [Source:UniProtKB/Swiss-Prot;Acc:Q8RY29]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.