Factsheet for TraesCS5A01G459000.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G468700.1	Wheat	extracellular	93.15	92.93
TraesCS5B01G469000.1	Wheat	extracellular	91.2	91.87
TraesCS5D01G470100.1	Wheat	extracellular	90.95	90.73
HORVU5Hr1G109980.2	Barley	extracellular, plastid	89.24	81.29
TraesCS5A01G459100.1	Wheat	extracellular	74.82	73.56
EER90686	Sorghum	plastid	66.01	61.93
Zm00001d034551_P001	Maize	extracellular	66.01	61.93
EER93240	Sorghum	extracellular	67.48	61.06
Zm00001d034552_P001	Maize	extracellular	65.77	61.0
TraesCS7A01G162500.1	Wheat	extracellular	60.64	59.05
EER90681	Sorghum	extracellular	66.01	57.82
Os03t0808000-00	Rice	extracellular	64.3	56.93
Zm00001d034559_P001	Maize	extracellular	65.04	56.0
Zm00001d013032_P001	Maize	extracellular	65.28	54.83
TraesCS1A01G124300.1	Wheat	extracellular, plastid	57.95	54.73
TraesCS4A01G066700.1	Wheat	extracellular	44.5	42.03
TraesCS2A01G405300.1	Wheat	extracellular, nucleus	41.08	41.48
TraesCS2A01G405100.1	Wheat	extracellular	41.32	40.53
TraesCS2A01G405600.1	Wheat	extracellular	31.3	40.13
TraesCS1A01G364800.2	Wheat	extracellular	39.85	39.37
TraesCS3A01G129500.1	Wheat	extracellular	36.19	36.36
TraesCS3A01G129400.1	Wheat	extracellular	35.21	35.12
TraesCS6A01G084500.1	Wheat	extracellular, golgi, vacuole	41.56	32.38
TraesCS1A01G418000.1	Wheat	extracellular	39.85	31.96
TraesCS3A01G024500.1	Wheat	extracellular	34.47	31.9
TraesCS7A01G330000.1	Wheat	extracellular	37.65	31.56
TraesCS1A01G365300.1	Wheat	extracellular	33.5	31.49
TraesCS1A01G365200.1	Wheat	extracellular	34.96	31.15
TraesCS1A01G311100.1	Wheat	extracellular	36.43	30.79
TraesCS3A01G225800.2	Wheat	extracellular	39.61	30.06

Protein Annotations

Gene3D:2.160.20.10	MapMan:21.3.5.1.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004650	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_28	InterPro:IPR012334	PFAM:PF00295
ScanProsite:PS00502	PANTHER:PTHR31375	PANTHER:PTHR31375:SF98	InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence
SMART:SM00710	SUPFAM:SSF51126	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS5A01G459000	EnsemblPlants:TraesCS5A01G459000.1	SEG:seg

Description

No Description!

Coordinates

chr5A:-:639292101..639293330

Molecular Weight (calculated)

43461.5 Da

IEP (calculated)

6.995

GRAVY (calculated)

-0.155

Length

409 amino acids

Sequence
(BLAST)

001: MASFMAAALV LMLLASSAGA SEASPAPAET QQNVFIVDNY GAHGDGKHDD TQPLAKAWNA ACSSSRPAML LIPEGKTYLL NSVTLSGPCK SSVVFMVKGT
101: LVAPRSRSAW RDNDTSRWIM IQGVTGLTVS GGGTINGNGD VWWTNSCKTN KALPCTKAPT ALTFHLCTNL QVENLKLVNS QQIHLSVEDC NAVQLARLSI
201: TAPGTSPNTD SIHITRSKDV QVKDCVIKTG DDCISIENGT RNLFVSKVVC GPGHGISVGS LGDDNSRAEV SGITIDSVQL YGTTNGARIK TWQGGSGYAK
301: GITFQNMIMD NVQNPIIIDQ NYCDSAKPCK SWGSAVEVSN VVFKNIRGTT VSKDAIKLSC SNSISCSDIV LENIDLKMEG GKGDTESTCQ NAKWQESGTV
401: IPQPCQFQN

Best Arabidopsis Sequence Match ( AT2G41850.1 )
(BLAST)

001: MARCTNLVTV FLLWALLMFS WCKASRISPN VYDHSYKRFK SDSLIKRRED ITGLRSFVRA SLRTPTTVSV SDFGAKGDGK TDDTQAFVNA WKKACSSNGA
101: VNLLVPKGNT YLLKSIQLTG PCNSILTVQI FGTLSASQKR SDYKDISKWI MFDGVNNLSV DGGDTGVVDG NGETWWQNSC KRNKAKPCTK APTALTFYNS
201: KSLIVKNLKV RNAQQIQISI EKCSNVQVSN VVVTAPADSP NTDGIHITNT QNIRVSESII GTGDDCISIE SGSQNVQIND ITCGPGHGIS IGSLGDDNSK
301: AFVSGVTVDG AKLSGTDNGV RIKTYQGGSG TASNIIFQNI QMDNVKNPII IDQDYCDKSK CTTEKSAVQV KNVVYRDISG TSASENAITF NCSKNYPCQG
401: IVLDRVNIKG GKATCTNANV VDKGAVLPQC NST

Arabidopsis Description

ADPG2Polygalacturonase ADPG2 [Source:UniProtKB/Swiss-Prot;Acc:Q8RY29]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.