Factsheet for Os03t0808000-00

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 3
vacuole 4
plasma membrane 4
golgi 3
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G468700.1	Wheat	extracellular	59.31	66.83
EER93240	Sorghum	extracellular	64.07	65.49
TraesCS5D01G470200.1	Wheat	extracellular	59.09	65.16
TraesCS5A01G459100.1	Wheat	extracellular	58.66	65.14
TraesCS5D01G470100.1	Wheat	extracellular	57.58	64.88
TraesCS5B01G469000.1	Wheat	extracellular	56.93	64.78
TraesCS5B01G468900.1	Wheat	extracellular	58.44	64.44
TraesCS5A01G459000.1	Wheat	extracellular	56.93	64.3
HORVU5Hr1G109970.1	Barley	extracellular	57.14	63.61
Zm00001d034552_P001	Maize	extracellular	59.52	62.36
EER90686	Sorghum	plastid	58.44	61.93
Zm00001d034551_P001	Maize	extracellular	58.23	61.7
HORVU5Hr1G109980.2	Barley	extracellular, plastid	58.01	59.69
EER90681	Sorghum	extracellular	60.17	59.53
Zm00001d034559_P001	Maize	extracellular	57.36	55.79
Zm00001d013032_P001	Maize	extracellular	58.66	55.65
Os03t0216800-01	Rice	extracellular	39.18	41.32
Os01t0296200-00	Rice	extracellular	22.51	39.1
Os05t0542800-02	Rice	extracellular	35.28	38.26
Os05t0578600-01	Rice	cytosol, extracellular	25.11	37.18
Os05t0279900-00	Rice	cytosol	25.11	36.83
Os01t0637500-00	Rice	cytosol, extracellular	26.19	35.8
Os05t0542900-01	Rice	extracellular	33.12	34.38
Os01t0549000-00	Rice	extracellular	20.13	32.75
Os02t0130200-01	Rice	extracellular, golgi	34.85	31.69
Os01t0636500-01	Rice	extracellular	33.33	28.62
Os01t0172900-00	Rice	nucleus	17.1	26.78
Os01t0329300-01	Rice	plastid	32.25	19.63

Protein Annotations

Gene3D:2.160.20.10	MapMan:50.3.2	UniProt:A0A0P0W527	ProteinID:BAS86966.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004650	GO:GO:0005575	GO:GO:0005576	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	GO:GO:0016798	GO:GO:0071555	InterPro:Glyco_hydro_28
InterPro:IPR012334	EnsemblPlantsGene:Os03g0808000	EnsemblPlants:Os03t0808000-00	PFAM:PF00295	ScanProsite:PS00502	PANTHER:PTHR31375
PANTHER:PTHR31375:SF98	InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SMART:SM00710	SUPFAM:SSF51126
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000393A4C1	SEG:seg	:	:

Description

Glycoside hydrolase, family 28 domain containing protein. (Os03t0808000-00)

Coordinates

chr3:+:33777471..33780350

Molecular Weight (calculated)

48170.8 Da

IEP (calculated)

6.496

GRAVY (calculated)

-0.071

Length

462 amino acids

Sequence
(BLAST)

001: MASGARKLVR SSFMASVRAL LALTFLLSGG AATAAAAMVR NGGSPSIYGG GGGEGAAVIG RGGRSLLQAA AAAAATTQSA VFSLDSYGAH GDGERDDTAA
101: LARAWSAACA SAAPAVVLVP ESRSYLLRQV TLSGPCESTI KLMVKGTLVA SPDMSNWNES NRRYWIVVRG VDGLAVGGGG TIDGNGEGWW ENSCKINRAL
201: VSVLTALSFH TCDNLSVNGL KMVNSQQIHM SVEDCTGVEL AHLSISAPGT SPNTDGIHIT HSKNVQVSDC TIKTGDDCVS IEDGTHGLHV TRLVCGPGHG
301: ISIGSLGDDN SRAEVSDIFI DTVHLYGTTN GARIKTWQGG SGYAKDIVFQ NMVMNSVKNP IIIDQNYCDS AKKCETQECH EHGSQGSAVE ISNVVFKNIA
401: GTTISKSAIT LNCSKNYPCY DISLQDINLE MVDDNGATGS TCQNAKWRKS GTVVPQPCTS TN

Best Arabidopsis Sequence Match ( AT3G57510.1 )
(BLAST)

001: MARCCRHLAV FLCVLLMLSL CKALSSNVDD GYGHEDGSFE SDSLLKLNND DVLSLISSDE TTLEASTVSV SNFGAKGDGK TDDTQAFKKA WKKACSTNGV
101: TTFLVPKGKT YLLKSTRFRG PCKSLRNFQI LGTLSASTKR SDYKDKNHWL ILEDVNNLSI DGGSTGIING NGKTWWQNSC KIDKSKPCTK APTALTLYNL
201: KNLNVKNLRV KNAQQIQISI EKCNKVEVSN VEITAPGDSP NTDGIHITNT QNIRVSNSDI GTGDDCISIE DGTQNLQIFD LTCGPGHGIS IGSLGDDNSK
301: AYVSGINVDG AKFSESDNGV RIKTYQGGSG TAKNIKFQNI RMENVKNPII IDQDYCDKDK CEDQESAVQV KNVVYKNISG TSATDVAITL NCSEKYPCQG
401: IVLENVKIKG GTASCKNANV KNQGTVSPKC S

Arabidopsis Description

ADPG1Polygalacturonase ADPG1 [Source:UniProtKB/Swiss-Prot;Acc:O23147]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.