Factsheet for TraesCS5B01G468700.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G469000.1	Wheat	extracellular	94.63	95.57
TraesCS5A01G459000.1	Wheat	extracellular	92.93	93.15
TraesCS5D01G470100.1	Wheat	extracellular	92.93	92.93
HORVU5Hr1G109980.2	Barley	extracellular, plastid	91.95	83.96
TraesCS5B01G468900.1	Wheat	extracellular	76.59	74.94
Zm00001d034551_P001	Maize	extracellular	67.8	63.76
EER90686	Sorghum	plastid	67.07	63.07
EER93240	Sorghum	extracellular	69.51	63.05
Zm00001d034552_P001	Maize	extracellular	67.56	62.81
TraesCS7B01G067800.1	Wheat	extracellular	61.46	60.0
Os03t0808000-00	Rice	extracellular	66.83	59.31
EER90681	Sorghum	extracellular	66.83	58.67
TraesCS1B01G083700.1	Wheat	extracellular	42.93	58.28
Zm00001d034559_P001	Maize	extracellular	66.1	57.05
TraesCS1B01G142700.1	Wheat	plastid	60.98	56.82
Zm00001d013032_P001	Maize	extracellular	66.34	55.85
TraesCS4B01G244300.1	Wheat	extracellular	45.61	43.19
TraesCS2B01G423400.1	Wheat	plastid	36.34	42.45
TraesCS2B01G423300.1	Wheat	extracellular	41.22	42.14
TraesCS1B01G382200.2	Wheat	extracellular	42.44	42.03
TraesCS2B01G423200.1	Wheat	extracellular	39.76	38.35
TraesCS3B01G148500.1	Wheat	extracellular	36.34	37.16
TraesCS3B01G148600.1	Wheat	extracellular	36.1	35.92
TraesCS1B01G382700.1	Wheat	extracellular	36.59	35.8
TraesCS6B01G118000.2	Wheat	extracellular, golgi, vacuole	42.93	33.33
TraesCS7B01G230600.1	Wheat	extracellular	38.78	32.65
TraesCS1B01G382800.1	Wheat	extracellular	34.39	32.49
TraesCS1B01G322500.1	Wheat	extracellular	37.32	31.61
TraesCS3B01G020300.1	Wheat	extracellular	34.15	31.6
TraesCS1B01G448100.1	Wheat	extracellular	40.24	31.13
TraesCS3B01G258600.2	Wheat	extracellular	40.24	30.73

Protein Annotations

Gene3D:2.160.20.10	MapMan:21.3.5.1.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004650	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_28	InterPro:IPR012334	PFAM:PF00295
ScanProsite:PS00502	PANTHER:PTHR31375	PANTHER:PTHR31375:SF98	InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence
SMART:SM00710	SUPFAM:SSF51126	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS5B01G468700	EnsemblPlants:TraesCS5B01G468700.1	SEG:seg

Description

No Description!

Coordinates

chr5B:-:642141127..642142359

Molecular Weight (calculated)

43496.5 Da

IEP (calculated)

7.055

GRAVY (calculated)

-0.163

Length

410 amino acids

Sequence
(BLAST)

001: MASFMAAVLV LLLLASSARA SEADPAPAET QQNVFIVDNY GARGDGKHDD AQPLAKAWNA ACSSSRPAVL LVPEGKTYLL SSVTLSGPCK SSVVFMVKGT
101: LVAPRSRSAW SQNDTSRWIL IQGVTGLTVS GGGTINGNGD VWWTNSCKVN KALPCTKAPT ALTFHQCNNL QVENLKLVNS QQIHLSVEDC SGVQLARLSI
201: TAPGTSPNTD GIHITRSKDV QVKDCVIKTG DDCVSIENGT HNLFVSKVVC GPGHGISIGS LGDDNSRAEV SGITIDSVQL YGTTNGARIK TWQGGSGYAK
301: DITFQNMVMD NVQNPIIIDQ NYCDSAKPCN RGQGSAVEVS NVVFKNIRGT TVSKDAIKLS CSHSISCSDI VLENINLKME GGKGDTESTC QNAKWQESGT
401: VIPQPCQFQN

Best Arabidopsis Sequence Match ( AT2G41850.1 )
(BLAST)

001: MARCTNLVTV FLLWALLMFS WCKASRISPN VYDHSYKRFK SDSLIKRRED ITGLRSFVRA SLRTPTTVSV SDFGAKGDGK TDDTQAFVNA WKKACSSNGA
101: VNLLVPKGNT YLLKSIQLTG PCNSILTVQI FGTLSASQKR SDYKDISKWI MFDGVNNLSV DGGDTGVVDG NGETWWQNSC KRNKAKPCTK APTALTFYNS
201: KSLIVKNLKV RNAQQIQISI EKCSNVQVSN VVVTAPADSP NTDGIHITNT QNIRVSESII GTGDDCISIE SGSQNVQIND ITCGPGHGIS IGSLGDDNSK
301: AFVSGVTVDG AKLSGTDNGV RIKTYQGGSG TASNIIFQNI QMDNVKNPII IDQDYCDKSK CTTEKSAVQV KNVVYRDISG TSASENAITF NCSKNYPCQG
401: IVLDRVNIKG GKATCTNANV VDKGAVLPQC NST

Arabidopsis Description

ADPG2Polygalacturonase ADPG2 [Source:UniProtKB/Swiss-Prot;Acc:Q8RY29]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.