CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90686	Sorghum	plastid	73.02	78.21
Zm00001d034559_P001	Maize	extracellular	78.8	77.47
EER93240	Sorghum	extracellular	69.38	71.68
TraesCS5D01G470200.1	Wheat	extracellular	60.39	67.3
TraesCS5D01G470100.1	Wheat	extracellular	58.89	67.07
TraesCS5B01G468900.1	Wheat	extracellular	60.17	67.06
TraesCS5B01G468700.1	Wheat	extracellular	58.67	66.83
TraesCS5A01G459100.1	Wheat	extracellular	59.31	66.59
TraesCS5A01G459000.1	Wheat	extracellular	57.82	66.01
HORVU5Hr1G109970.1	Barley	extracellular	58.24	65.54
TraesCS5B01G469000.1	Wheat	extracellular	56.96	65.52
HORVU5Hr1G109980.2	Barley	extracellular, plastid	58.03	60.36
Os03t0808000-00	Rice	extracellular	59.53	60.17
KXG39856	Sorghum	extracellular	38.97	42.33
EES18597	Sorghum	extracellular	34.48	39.46
KXG26899	Sorghum	extracellular	33.19	36.9
KXG31745	Sorghum	extracellular	31.48	34.11
EES04449	Sorghum	extracellular	37.26	33.46
KXG32718	Sorghum	extracellular	30.84	33.03
EES00620	Sorghum	extracellular	34.05	31.42
KXG22449	Sorghum	extracellular, golgi	30.41	30.34
EES01142	Sorghum	extracellular	34.48	30.26
EES20001	Sorghum	extracellular	34.26	29.8
KXG32428	Sorghum	mitochondrion	32.98	29.62
KXG32426	Sorghum	extracellular	34.05	22.98

Protein Annotations

Gene3D:2.160.20.10	MapMan:21.3.5.1.1	UniProt:C5WW37	EnsemblPlants:EER90681	ProteinID:EER90681	ProteinID:EER90681.2
GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0004650	GO:GO:0005575	GO:GO:0005576
GO:GO:0005618	GO:GO:0005623	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009505
GO:GO:0009506	GO:GO:0009664	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	GO:GO:0016798
GO:GO:0030312	GO:GO:0071555	GO:GO:0098869	InterPro:Glyco_hydro_28	InterPro:IPR012334	PFAM:PF00295
ScanProsite:PS00502	PANTHER:PTHR31375	PANTHER:PTHR31375:SF98	InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence
SMART:SM00710	EnsemblPlantsGene:SORBI_3001G045400	SUPFAM:SSF51126	SignalP:SignalP-noTM	UniParc:UPI00081AB350	SEG:seg

Description

hypothetical protein

Coordinates

chr1:-:3361277..3363103

Molecular Weight (calculated)

50389.2 Da

IEP (calculated)

9.837

GRAVY (calculated)

-0.277

Length

467 amino acids

Sequence
(BLAST)

001: MASSGKPTKL AFMAPLPLPL LALLFLSSTL EAVVGASNAN DTSADGASYT CSSGSSRFLA LPSSSSHSHR SVFSLDRYGA RGDGRHDDTR ALAAAWKAAC
101: ASPRPAAVLV PNGRRYLLKV VTLRGPCKST VAVTVKGTLV ASPNRADWSD RDRRLWIVFR SINKLTLNGG GAIDGNGHKW WPYSCKINKG LPCKEAPTAL
201: SFHYCTNLRV DNLKIVNSQQ IHMSVEDSTN VQLAKLSITA PGTSPNTDGI HITRSKDVRV TNCKIKTGDD CISIEDGTHK LHVSNVVCGP GHGISIGSLG
301: DDNSRAQVSG ITIDSVQLHG TTNGARIKTY QGGSGYAKDI TFQNMIMYNV KNPIIIDQNY CDKAKPCREQ RSAVQISNVV FKNIRGTTIT KDAIKMHCSK
401: NVPCQGITLQ NIDLKMQGGK GNTESTCQNA KWRKYGKVVP QPCTSKIMGT FGDLLEFLLA SDSWSSW

Best Arabidopsis Sequence Match ( AT3G57510.1 )
(BLAST)

001: MARCCRHLAV FLCVLLMLSL CKALSSNVDD GYGHEDGSFE SDSLLKLNND DVLSLISSDE TTLEASTVSV SNFGAKGDGK TDDTQAFKKA WKKACSTNGV
101: TTFLVPKGKT YLLKSTRFRG PCKSLRNFQI LGTLSASTKR SDYKDKNHWL ILEDVNNLSI DGGSTGIING NGKTWWQNSC KIDKSKPCTK APTALTLYNL
201: KNLNVKNLRV KNAQQIQISI EKCNKVEVSN VEITAPGDSP NTDGIHITNT QNIRVSNSDI GTGDDCISIE DGTQNLQIFD LTCGPGHGIS IGSLGDDNSK
301: AYVSGINVDG AKFSESDNGV RIKTYQGGSG TAKNIKFQNI RMENVKNPII IDQDYCDKDK CEDQESAVQV KNVVYKNISG TSATDVAITL NCSEKYPCQG
401: IVLENVKIKG GTASCKNANV KNQGTVSPKC S

Arabidopsis Description

ADPG1Polygalacturonase ADPG1 [Source:UniProtKB/Swiss-Prot;Acc:O23147]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.