Factsheet for HORVU5Hr1G109970.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 7
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G459100.1	Wheat	extracellular	87.95	87.74
TraesCS5D01G470200.1	Wheat	extracellular	87.95	87.11
TraesCS5B01G468900.1	Wheat	extracellular	87.23	86.4
HORVU5Hr1G109980.2	Barley	extracellular, plastid	72.29	66.82
EER90686	Sorghum	plastid	66.51	63.3
Zm00001d034551_P001	Maize	extracellular	64.58	61.47
Zm00001d034552_P001	Maize	extracellular	64.82	61.0
EER93240	Sorghum	extracellular	65.54	60.18
HORVU7Hr1G034150.1	Barley	extracellular	58.55	58.7
EER90681	Sorghum	extracellular	65.54	58.24
Os03t0808000-00	Rice	extracellular	63.61	57.14
Zm00001d034559_P001	Maize	extracellular	62.89	54.95
Zm00001d013032_P001	Maize	extracellular	63.61	54.21
HORVU1Hr1G013520.1	Barley	cytosol	50.12	52.93
HORVU0Hr1G038940.1	Barley	cytosol	44.1	45.3
HORVU2Hr1G096130.1	Barley	extracellular	39.04	40.0
HORVU3Hr1G024420.1	Barley	cytosol	21.45	39.91
HORVU3Hr1G031180.1	Barley	extracellular	12.29	36.17
HORVU7Hr1G078960.2	Barley	extracellular	38.8	32.92
HORVU1Hr1G079130.2	Barley	extracellular	33.73	32.26
HORVU6Hr1G015390.2	Barley	extracellular, golgi	40.48	31.82
HORVU1Hr1G067840.1	Barley	extracellular, plastid	36.14	31.51
HORVU1Hr1G079140.6	Barley	plastid	36.14	30.67
HORVU3Hr1G006180.2	Barley	extracellular	31.57	30.47
HORVU3Hr1G056270.10	Barley	extracellular	39.04	30.45
HORVU1Hr1G091430.5	Barley	extracellular	39.76	29.78

Protein Annotations

Gene3D:2.160.20.10	MapMan:21.3.5.1.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004650	GO:GO:0005575
GO:GO:0005576	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043
GO:GO:0016787	GO:GO:0016798	GO:GO:0071555	InterPro:Glyco_hydro_28	EnsemblPlantsGene:HORVU5Hr1G109970	EnsemblPlants:HORVU5Hr1G109970.1
InterPro:IPR012334	UniProt:M0VC03	PFAM:PF00295	ScanProsite:PS00502	PANTHER:PTHR31375	PANTHER:PTHR31375:SF98
InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SMART:SM00710	SUPFAM:SSF51126	SignalP:SignalP-noTM
UniParc:UPI000295CB23	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:631521904..631523564

Molecular Weight (calculated)

45066.1 Da

IEP (calculated)

9.474

GRAVY (calculated)

-0.221

Length

415 amino acids

Sequence
(BLAST)

001: MLTRSFFAPL LVLLLLSVSN ANSVQDTGCS LKSSTQKIVF VLDNYGARGD GKHDDTQALA RAWNAACSSS RPAVLLVPKG KTYLLKAITL SGPCKSNIVF
101: KVKGSLIAPS SMSAWSENDR RRWIFLQRVT GLTVNGGGTI NGNGEMWWKN SCKTNKVLPC KEAPTALSFH LCNSLKVDNL KIVNSQQMHV SVQDCSNVHL
201: ARLTITAPGT SPNTDGIHIT HSKYVQVRDC LIRTGDDCVS IENGTHNLHV TRVVCGPGHG ISIGSLGDHE SRAEVSRIYI DTVRLYGTTN GARIKTWQGG
301: SGYAKDIVFQ NMIMDNVQNP IIIDQNYCDS AKPCTKNQKS AVEVRNVVFK NIRGTTISRD AINLSCSKDL PCSGIALENI DLNLEGGKGG TESTCQNARW
401: KKFGNVVPLP CKGKK

Best Arabidopsis Sequence Match ( AT2G41850.1 )
(BLAST)

001: MARCTNLVTV FLLWALLMFS WCKASRISPN VYDHSYKRFK SDSLIKRRED ITGLRSFVRA SLRTPTTVSV SDFGAKGDGK TDDTQAFVNA WKKACSSNGA
101: VNLLVPKGNT YLLKSIQLTG PCNSILTVQI FGTLSASQKR SDYKDISKWI MFDGVNNLSV DGGDTGVVDG NGETWWQNSC KRNKAKPCTK APTALTFYNS
201: KSLIVKNLKV RNAQQIQISI EKCSNVQVSN VVVTAPADSP NTDGIHITNT QNIRVSESII GTGDDCISIE SGSQNVQIND ITCGPGHGIS IGSLGDDNSK
301: AFVSGVTVDG AKLSGTDNGV RIKTYQGGSG TASNIIFQNI QMDNVKNPII IDQDYCDKSK CTTEKSAVQV KNVVYRDISG TSASENAITF NCSKNYPCQG
401: IVLDRVNIKG GKATCTNANV VDKGAVLPQC NST

Arabidopsis Description

ADPG2Polygalacturonase ADPG2 [Source:UniProtKB/Swiss-Prot;Acc:Q8RY29]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.