Factsheet for HORVU7Hr1G078960.2

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G326800.1	Wheat	extracellular	95.71	95.9
TraesCS7A01G330000.1	Wheat	extracellular	95.5	95.7
TraesCS7B01G230600.1	Wheat	extracellular	94.68	95.07
Os05t0279900-00	Rice	cytosol	59.1	91.75
GSMUA_Achr8P22240_001	Banana	extracellular	63.6	65.2
VIT_05s0020g00420.t01	Wine grape	extracellular	61.96	63.52
PGSC0003DMT400075723	Potato	extracellular	60.53	60.91
KRH11881	Soybean	extracellular	59.51	60.75
KRH42407	Soybean	extracellular	60.12	60.74
KRH36916	Soybean	extracellular, nucleus	58.69	60.55
AT1G48100.1	Thale cress	extracellular	58.49	60.21
Solyc04g008230.2.1	Tomato	nucleus	60.33	60.2
KRH58524	Soybean	extracellular	60.33	60.2
CDY43307	Canola	extracellular	57.67	59.62
Bra018707.1-P	Field mustard	extracellular	57.26	59.32
CDX93644	Canola	extracellular	57.26	59.32
HORVU1Hr1G067840.1	Barley	extracellular, plastid	51.74	53.15
HORVU3Hr1G031180.1	Barley	extracellular	13.7	47.52
HORVU0Hr1G038940.1	Barley	cytosol	32.72	39.6
HORVU5Hr1G109970.1	Barley	extracellular	32.92	38.8
HORVU1Hr1G013520.1	Barley	cytosol	31.08	38.68
HORVU7Hr1G034150.1	Barley	extracellular	32.11	37.92
HORVU3Hr1G056270.10	Barley	extracellular	41.1	37.78
HORVU1Hr1G091430.5	Barley	extracellular	41.31	36.46
HORVU5Hr1G109980.2	Barley	extracellular, plastid	32.72	35.63
HORVU3Hr1G024420.1	Barley	cytosol	16.16	35.43
HORVU2Hr1G096130.1	Barley	extracellular	28.43	34.32
HORVU6Hr1G015390.2	Barley	extracellular, golgi	31.49	29.17
HORVU1Hr1G079130.2	Barley	extracellular	25.77	29.03
HORVU3Hr1G006180.2	Barley	extracellular	25.36	28.84
HORVU1Hr1G079140.6	Barley	plastid	28.63	28.63

Protein Annotations

Gene3D:2.160.20.10	MapMan:50.3.2	UniProt:A0A287X0W6	GO:GO:0003674	GO:GO:0003824	GO:GO:0004650
GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009831	GO:GO:0009987	GO:GO:0016043	GO:GO:0016049	GO:GO:0016787
GO:GO:0016798	GO:GO:0030312	GO:GO:0040007	GO:GO:0071555	InterPro:Glyco_hydro_28	EnsemblPlantsGene:HORVU7Hr1G078960
EnsemblPlants:HORVU7Hr1G078960.2	InterPro:IPR012334	PFAM:PF00295	ScanProsite:PS00502	PANTHER:PTHR31375	PANTHER:PTHR31375:SF26
InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SMART:SM00710	SUPFAM:SSF51126	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI000B474ACF	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr7H:+:464071861..464077072

Molecular Weight (calculated)

51946.2 Da

IEP (calculated)

4.711

GRAVY (calculated)

-0.115

Length

489 amino acids

Sequence
(BLAST)

001: MAASRLALPR LMLLAMLVLL VALLGVGVGV DGRSHPHKKP PRAGVGSRHS RVGASVGTVA SSPAIPPDDD GAPPPGGIVP SDPATPFRPE PCVFDVRAYG
101: ATGESTADDT EAFRAAWRAA CAVESAVLLV PSDGTFTIST TTFSGPCKPG LVFQVDGVLM PPDGPDCWPP SDNRRQWLVF SNLDGLTLRG AGTIEGNGEE
201: WWNLPCKPHR GPNGSTLHGP CDSPTLIRFF ESCNLVVQGL RVENSPEFHF RFDGCSDVLV DGLFISSPAN SPNTDGIHVE NTERVGIYNS KISNGDDCIS
301: IGTGSYDVDI QNVTCGPGHG ISIGSLGVHN SQACVANVTV RDAVIRNSDN GLRIKTWQGG MGSVSGITFD GVTMENVRNC IIIDQYYCQD KRCMNQSTAV
401: HVTDVSYANV RGSYDVRSAP IHFACSDTVP CTNVTMAEVE LLPFSGELVD DPYCWSAYGA QQTPTIPPVS CLQDGVPDSL LDNPDLKCR

Best Arabidopsis Sequence Match ( AT1G48100.1 )
(BLAST)

001: MRRLSGILVI YIISTVLFGH FTNVARARYH YHKGRHGVTH PLPPPPPPPL ETANPPDQVP SDPYPSPDPA PGDSDSGCVF DVTSFGAVGD GSCDDTAAFQ
101: DAWKAACAVE SGVVLAPEGG VFKITSTIFS GPCKPGLVFQ LDGVLMPPDG PEEWPEKDNK NQWLVFYRLD GFTFSGKGTV EGNGQKWWDL PCKPHRGPDG
201: SSSSGPCASP TMIRFFMSNN IEVKGLRIQN SPQFHMKFDG CQGVLINEIQ ISSPKLSPNT DGIHLGNTRS VGIYNSVVSN GDDCISIGTG CSDVDIQGVT
301: CGPSHGISIG SLGVHNSQAC VSNITVRNTV IRDSDNGLRV KTWQGGTGSV SNLLFENIQM ENVLNCIIVD QYYCQSKDCR NETSAVKVFD VEYRNIKGTY
401: DVRSPPIHFA CSDTVACTNI TMSEVELLPE EGELVDDPFC WNAYGKQETL TIPPIDCLLD GSPVVEEAYD SNYGC

Arabidopsis Description

Polygalacturonase At1g48100 [Source:UniProtKB/Swiss-Prot;Acc:Q949Z1]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.