Factsheet for TraesCS7D01G326800.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G330000.1	Wheat	extracellular	97.75	97.75
TraesCS7B01G230600.1	Wheat	extracellular	96.52	96.71
HORVU7Hr1G078960.2	Barley	extracellular	95.9	95.71
Os05t0279900-00	Rice	cytosol	59.22	91.75
GSMUA_Achr8P22240_001	Banana	extracellular	63.93	65.41
VIT_05s0020g00420.t01	Wine grape	extracellular	62.91	64.36
PGSC0003DMT400075723	Potato	extracellular	61.27	61.52
KRH11881	Soybean	extracellular	59.84	60.96
KRH42407	Soybean	extracellular	60.45	60.95
Solyc04g008230.2.1	Tomato	nucleus	61.07	60.82
KRH36916	Soybean	extracellular, nucleus	58.81	60.55
AT1G48100.1	Thale cress	extracellular	58.81	60.42
KRH58524	Soybean	extracellular	60.66	60.41
CDY43307	Canola	extracellular	57.99	59.83
Bra018707.1-P	Field mustard	extracellular	57.58	59.53
CDX93644	Canola	extracellular	57.58	59.53
TraesCS1D01G311000.1	Wheat	extracellular	50.82	51.77
TraesCS1D01G129600.2	Wheat	cytosol, extracellular, nucleus	26.43	39.81
TraesCS5D01G470100.1	Wheat	extracellular	33.2	39.51
TraesCS5D01G470200.1	Wheat	extracellular	33.4	38.9
TraesCS1D01G370300.3	Wheat	extracellular	32.17	38.2
TraesCS1D01G425600.1	Wheat	extracellular	41.19	38.14
TraesCS7D01G164200.1	Wheat	extracellular	32.58	37.86
TraesCS4D01G243600.1	Wheat	extracellular	33.4	37.64
TraesCS3D01G223900.1	Wheat	extracellular	40.78	37.13
TraesCS1D01G066400.1	Wheat	cytosol	28.28	36.22
TraesCS2D01G402100.1	Wheat	extracellular	29.3	35.31
TraesCS2D01G402200.1	Wheat	extracellular	27.87	34.78
TraesCS2D01G402000.1	Wheat	extracellular	30.12	34.35
TraesCS3D01G130300.1	Wheat	extracellular	27.66	33.67
TraesCS1D01G370700.1	Wheat	extracellular	28.28	32.94
TraesCS2D01G402300.1	Wheat	extracellular	22.13	32.43
TraesCS3D01G130400.1	Wheat	extracellular	27.25	32.28
TraesCS1D01G066300.1	Wheat	extracellular, golgi	32.99	32.26
TraesCS3D01G021700.1	Wheat	extracellular	26.64	29.48
TraesCS1D01G370800.1	Wheat	extracellular	25.82	29.03

Protein Annotations

Gene3D:2.160.20.10	MapMan:50.3.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0004650	GO:GO:0005575
GO:GO:0005618	GO:GO:0005623	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009831
GO:GO:0009987	GO:GO:0016043	GO:GO:0016049	GO:GO:0016787	GO:GO:0030312	GO:GO:0040007
InterPro:Glyco_hydro_28	InterPro:IPR012334	PFAM:PF00295	ScanProsite:PS00502	PANTHER:PTHR31375	PANTHER:PTHR31375:SF26
InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SMART:SM00710	SUPFAM:SSF51126	SignalP:SignalP-noTM
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS7D01G326800	EnsemblPlants:TraesCS7D01G326800.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr7D:-:417356334..417359383

Molecular Weight (calculated)

51925.2 Da

IEP (calculated)

5.017

GRAVY (calculated)

-0.150

Length

488 amino acids

Sequence
(BLAST)

001: MAAARLGLPR LMLAMLVLVA LLGVGVDGRN HVHKKPPRAG ASSRHSRVGA KVGTVASSPA VPPDDDATAP APPPGGIVPS DPATPFRPEP CVFDVRAYGA
101: TGESTADDTE AFRAAWKAAC AVESAVLLVP SDGTFTISTT TFSGPCKPGL VFQVDGVLMP PDGPDCWPPS DNRRQWLIFS NLDGLTLRGA GTIEGNGEEW
201: WNLPCKPHRG PNGSTLHGPC DSPTLIRFFE SSNLVVRGLR VENSPEFHFR FDGCSDVLVD GLFIRSPANS PNTDGIHVEN TERVGIYNSK ISNGDDCISI
301: GTGSYDVDIQ NVTCGPGHGI SIGSLGVHNS QACVANVTVR NAVIRNSDNG LRIKTWQGGM GSVSGIAFDG VTMENVRNCI IIDQYYCQDK RCMNQSTAVH
401: VTDVSYANVR GSYDVRSAPI HFACSDTVPC TNVTMAEVEL LPFSGELVDD PYCWSAYGAQ QTPTIPPVSC LQDGVPESLL DNPDLKCR

Best Arabidopsis Sequence Match ( AT1G48100.1 )
(BLAST)

001: MRRLSGILVI YIISTVLFGH FTNVARARYH YHKGRHGVTH PLPPPPPPPL ETANPPDQVP SDPYPSPDPA PGDSDSGCVF DVTSFGAVGD GSCDDTAAFQ
101: DAWKAACAVE SGVVLAPEGG VFKITSTIFS GPCKPGLVFQ LDGVLMPPDG PEEWPEKDNK NQWLVFYRLD GFTFSGKGTV EGNGQKWWDL PCKPHRGPDG
201: SSSSGPCASP TMIRFFMSNN IEVKGLRIQN SPQFHMKFDG CQGVLINEIQ ISSPKLSPNT DGIHLGNTRS VGIYNSVVSN GDDCISIGTG CSDVDIQGVT
301: CGPSHGISIG SLGVHNSQAC VSNITVRNTV IRDSDNGLRV KTWQGGTGSV SNLLFENIQM ENVLNCIIVD QYYCQSKDCR NETSAVKVFD VEYRNIKGTY
401: DVRSPPIHFA CSDTVACTNI TMSEVELLPE EGELVDDPFC WNAYGKQETL TIPPIDCLLD GSPVVEEAYD SNYGC

Arabidopsis Description

Polygalacturonase At1g48100 [Source:UniProtKB/Swiss-Prot;Acc:Q949Z1]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.