CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH42407	Soybean	extracellular	95.31	96.49
KRH36916	Soybean	extracellular, nucleus	76.33	78.9
KRH11881	Soybean	extracellular	76.53	78.29
VIT_05s0020g00420.t01	Wine grape	extracellular	68.16	70.02
AT1G48100.1	Thale cress	extracellular	67.35	69.47
Os05t0279900-00	Rice	cytosol	44.49	69.21
Bra018707.1-P	Field mustard	extracellular	65.71	68.22
CDX93644	Canola	extracellular	65.71	68.22
CDY43307	Canola	extracellular	65.71	68.08
PGSC0003DMT400075723	Potato	extracellular	66.33	66.87
GSMUA_Achr8P06220_001	Banana	extracellular	63.47	66.45
Solyc04g008230.2.1	Tomato	nucleus	66.33	66.33
TraesCS7B01G230600.1	Wheat	extracellular	60.41	60.78
TraesCS7D01G326800.1	Wheat	extracellular	60.41	60.66
TraesCS7A01G330000.1	Wheat	extracellular	60.41	60.66
GSMUA_Achr8P22240_001	Banana	extracellular	58.98	60.59
HORVU7Hr1G078960.2	Barley	extracellular	60.2	60.33
KRG96576	Soybean	extracellular	54.29	57.58
KRH68311	Soybean	extracellular	53.27	56.49
KRH69173	Soybean	extracellular	54.49	56.45
KRG96690	Soybean	extracellular	52.65	56.21
KRH31755	Soybean	extracellular	54.08	55.79
Zm00001d040725_P002	Maize	extracellular, vacuole	53.27	51.99
KXG32428	Sorghum	mitochondrion	53.47	50.38
KRH56581	Soybean	extracellular	37.55	41.91
KRG93260	Soybean	extracellular	36.94	40.86
KRH45648	Soybean	nucleus	43.47	39.59
KXG32426	Sorghum	extracellular	55.71	39.45
KRG99364	Soybean	extracellular, nucleus	42.86	39.03
KRH69612	Soybean	extracellular	36.12	38.31
KRH23942	Soybean	extracellular	34.29	38.18
KRH74551	Soybean	extracellular	35.71	37.96
KRH32949	Soybean	extracellular	33.67	37.67
KRH23567	Soybean	extracellular	30.82	37.66
KRH71979	Soybean	extracellular	32.86	37.62
KRH39858	Soybean	extracellular	33.67	37.41
KRH66273	Soybean	extracellular	23.06	36.45
KRH14715	Soybean	cytosol, extracellular, nucleus, plastid	25.71	36.31
KRH23786	Soybean	cytosol, extracellular, nucleus, plastid	26.53	36.11
KRH13966	Soybean	extracellular	32.24	35.99
Os01t0329300-01	Rice	plastid	55.51	35.84
KRH05150	Soybean	extracellular	19.59	35.69
KRH66276	Soybean	extracellular	25.71	35.49
KRH48978	Soybean	extracellular	21.43	35.23
Zm00001d009167_P001	Maize	extracellular	54.69	34.99
KRH09740	Soybean	extracellular	30.2	34.82
KRG88958	Soybean	extracellular	25.1	34.65
KRH66955	Soybean	extracellular	32.45	34.27
KRH09752	Soybean	extracellular	31.43	33.62
KRH33163	Soybean	extracellular, plastid	32.45	33.33
KRH66305	Soybean	extracellular	24.69	31.43
KRG95273	Soybean	extracellular	32.86	30.78
KRG99363	Soybean	extracellular	35.31	19.64

Protein Annotations

Gene3D:2.160.20.10	MapMan:50.3.2	EntrezGene:732599	EMBL:ACUP02003267	EnsemblPlantsGene:GLYMA_05G133400	GO:GO:0003674
GO:GO:0003824	GO:GO:0004650	GO:GO:0005575	GO:GO:0005576	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	GO:GO:0016798	GO:GO:0071555
InterPro:Glyco_hydro_28	UniProt:I1K377	InterPro:IPR012334	EnsemblPlants:KRH58524	ProteinID:KRH58524	ProteinID:KRH58524.1
ProteinID:KRH58525.1	ProteinID:KRH58526.1	PFAM:PF00295	ScanProsite:PS00502	PANTHER:PTHR31375	PANTHER:PTHR31375:SF26
InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SMART:SM00710	SUPFAM:SSF51126	SignalP:SignalP-noTM
UniParc:UPI000233A9DC	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:32639275..32645721

Molecular Weight (calculated)

52819.0 Da

IEP (calculated)

4.839

GRAVY (calculated)

-0.246

Length

490 amino acids

Sequence
(BLAST)

001: MDLIRVFFTL CITVILLNHN FGNVEGRYHH HTKQKKVSTA PADSSTEPEK PSVPPPSDSP SVPSDPSASP PSNSPSVPSD PYPKDNQTSS SDCVFDVRSF
101: GAVGDGCADD TRAFRAAWKA ACAVDSGVVL APENYIFKIS STIFSGPCKP GLVFQVDGTL MAPDGPNSWP EADSRNQWLV FYRLDQMTLN GTGTIEGNGD
201: KWWDLPCKPH RGPSGKTLSG PCGSPAMIRF FMSSNLKVNG LKIQNSPQFH MIFNGCQGVL IDKLSISSPK LSPNTDGIHV ENSKYVGIYN SMISNGDDCI
301: SIGPGSSNVD IAGLTCGPSH GISIGSLGVH NSQACVSNLT VRDSIIRESD NGLRIKTWQG GMGSVSSLRF ENIQMENVGN CIIIDQYYCM SKECLNQTSA
401: VHVNDVSYSN IKGTYDVRTA PIHFACSDTV ACTNITLSEV ELLPFEGALL DDPFCWNAYG TQETLTIPPI NCLREGDPET VGDLSEYQCS

Best Arabidopsis Sequence Match ( AT1G02460.1 )
(BLAST)

001: MLTSTYNRNQ VLGFMTLILT LMSLSEARNH HHKEKHKHNN HNHHSSKPKP PSSSISQPPT PPPGPPDSPA PSLPPSPSDD PADDNNGIYN VRKYGAVGDG
101: ETDDTEAFKT AWDSSCNNEN NTDSVLLVPY GYTFMIQSTI FTGPCRSYQF FQVDGTIVTP DGPESWPSNI SKRQWLVFYR VNGMALKGEG VIDGRGQKWW
201: DLPCKPHRSV NKSAIVTGPC DSPIALRFFM SSNLRVEGLQ IKNSPQFHFR FDGCQGVHVE SLHITAPPLS PNTDGIHIEN SNSVTIYNSI ISNGDDCVSI
301: GSGSYDVDIR NLTCGPGGHG ISIGSLGNHN SRACVSNITV RDSVIKYSDN GVRIKTWQGG SGSVSGVTFN NIHVDSVRNP IIIDQYYCMT KDCANKTSAV
401: FVSDIAYQGI KGTYDIRSPP MHFGCSDAVP CTNLTLSDIE LLPAKGEIVL DPFCWNAYGI AEELSIPPVW CLMSDPPKGL QGSLVDKCGS S

Arabidopsis Description

At1g02460 [Source:UniProtKB/TrEMBL;Acc:Q9FWX5]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.