CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH69173	Soybean	extracellular	96.0	96.41
KRG96576	Soybean	extracellular	78.32	80.52
KRH68311	Soybean	extracellular	77.68	79.87
VIT_07s0005g02090.t01	Wine grape	extracellular	70.32	71.83
CDY67535	Canola	extracellular	45.68	69.77
Solyc01g079130.1.1	Tomato	extracellular	67.37	67.8
PGSC0003DMT400013344	Potato	extracellular	67.37	67.8
Bra032600.1-P	Field mustard	extracellular	66.32	64.15
CDX89966	Canola	extracellular	66.32	64.15
CDY15246	Canola	extracellular	66.32	64.15
Bra033328.1-P	Field mustard	extracellular	66.11	63.95
CDX77909	Canola	extracellular	66.11	63.95
AT1G02460.1	Thale cress	extracellular	66.11	63.95
GSMUA_Achr11P...	Banana	extracellular	58.32	63.53
Os01t0296200-00	Rice	extracellular	35.16	62.78
KRG96690	Soybean	extracellular	60.0	62.09
GSMUA_Achr9P16670_001	Banana	extracellular, plasma membrane	62.53	59.28
AT4G01890.1	Thale cress	extracellular	57.68	58.67
Bra000911.1-P	Field mustard	extracellular, vacuole	59.79	58.44
HORVU1Hr1G067840.1	Barley	extracellular, plastid	58.11	57.98
TraesCS1D01G311000.1	Wheat	extracellular	58.32	57.83
TraesCS1B01G322500.1	Wheat	extracellular	58.53	57.44
TraesCS1A01G311100.1	Wheat	extracellular	58.32	57.23
KRH36916	Soybean	extracellular, nucleus	57.05	57.17
KRH11881	Soybean	extracellular	57.26	56.78
KRH42407	Soybean	extracellular	56.42	55.37
CDY71357	Canola	extracellular, vacuole	36.42	54.57
KRH58524	Soybean	extracellular	55.79	54.08
Zm00001d040589_P001	Maize	extracellular	55.37	52.71
EES00620	Sorghum	extracellular	54.74	51.38
Zm00001d009057_P001	Maize	extracellular	45.05	50.59
GSMUA_Achr3P08400_001	Banana	extracellular	59.16	50.0
KRH56581	Soybean	extracellular	40.0	43.28
KRG93260	Soybean	extracellular	40.0	42.89
KRH69612	Soybean	extracellular	39.58	40.69
KRH74551	Soybean	extracellular	38.95	40.13
KRH45648	Soybean	nucleus	45.05	39.78
KRG99364	Soybean	extracellular, nucleus	44.21	39.03
KRH71979	Soybean	extracellular	33.26	36.92
KRH09752	Soybean	extracellular	34.74	36.03
KRH23567	Soybean	extracellular	30.11	35.66
KRH23942	Soybean	extracellular	32.63	35.23
KRH66273	Soybean	extracellular	22.95	35.16
KRH32949	Soybean	extracellular	32.21	34.93
KRH13966	Soybean	extracellular	32.21	34.85
KRG88958	Soybean	extracellular	25.89	34.65
KRH14715	Soybean	cytosol, extracellular, nucleus, plastid	25.26	34.58
KRH05150	Soybean	extracellular	19.58	34.57
KRH48978	Soybean	extracellular	21.68	34.56
KRH66955	Soybean	extracellular	33.68	34.48
KRH39858	Soybean	extracellular	32.0	34.47
KRH23786	Soybean	cytosol, extracellular, nucleus, plastid	25.89	34.17
KRH66276	Soybean	extracellular	25.26	33.8
KRH33163	Soybean	extracellular, plastid	33.89	33.75
KRH09740	Soybean	extracellular	29.89	33.41
KRH66305	Soybean	extracellular	25.89	31.95
KRG95273	Soybean	extracellular	34.95	31.74
KRG99363	Soybean	extracellular	37.89	20.43

Protein Annotations

EntrezGene:100776338	Gene3D:2.160.20.10	MapMan:50.3.2	EMBL:ACUP02006081	EnsemblPlantsGene:GLYMA_10G010000	GO:GO:0003674
GO:GO:0003824	GO:GO:0004650	GO:GO:0005575	GO:GO:0005576	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	GO:GO:0016798	GO:GO:0071555
InterPro:Glyco_hydro_28	UniProt:I1L7L9	InterPro:IPR012334	EnsemblPlants:KRH31755	ProteinID:KRH31755	ProteinID:KRH31755.1
PFAM:PF00295	ScanProsite:PS00502	PANTHER:PTHR31375	PANTHER:PTHR31375:SF43	InterPro:PbH1	InterPro:Pectin_lyas_fold
InterPro:Pectin_lyase_fold/virulence	SMART:SM00710	SUPFAM:SSF51126	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000233C37A
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:935107..937794

Molecular Weight (calculated)

51629.9 Da

IEP (calculated)

6.367

GRAVY (calculated)

-0.201

Length

475 amino acids

Sequence
(BLAST)

001: MRHCHILTLA LSLYFLALFL PTQARHHYHK KHKHTYYHNA PEISPSPAPA PAPSNASDEA TSPSPSDNEN YHNASNSLFD VRTFGAIGDG ITDDTESFKM
101: AWDTACQSES PVKVILVPQG FSFVIQSTIF TGPCKGGLVL KVDGTLMPPD GPESWPKNNS KRQWLVFFRI NGMSLEGSGL IDGRGAKWWD LPCKPHKGPN
201: GTTSPGPCDS PVAIRFFMSS NLTVQGLRIK NSPQFHFRFD GCESVHVESI YITAPALSPN TDGIHIENTN DVRIYNSVIS NGDDCVSIGA GCHDVDIKNI
301: TCGPGHGISI GSLGNHNSRA CVSNITVRDS VIKVSDNGVR IKTWQGGAGS VSGVTFSNIH MESVRNPIIV DQFYCLSKDC SNKTSAVFVT DIVYANIKGT
401: YDIRHPPMRF ACSDSVPCTN LTLSDIELLP DQGDIVLDPF CWSAYGNSET LTIPPVFCLL EGLPQSISGN DIDHC

Best Arabidopsis Sequence Match ( AT1G02460.1 )
(BLAST)

001: MLTSTYNRNQ VLGFMTLILT LMSLSEARNH HHKEKHKHNN HNHHSSKPKP PSSSISQPPT PPPGPPDSPA PSLPPSPSDD PADDNNGIYN VRKYGAVGDG
101: ETDDTEAFKT AWDSSCNNEN NTDSVLLVPY GYTFMIQSTI FTGPCRSYQF FQVDGTIVTP DGPESWPSNI SKRQWLVFYR VNGMALKGEG VIDGRGQKWW
201: DLPCKPHRSV NKSAIVTGPC DSPIALRFFM SSNLRVEGLQ IKNSPQFHFR FDGCQGVHVE SLHITAPPLS PNTDGIHIEN SNSVTIYNSI ISNGDDCVSI
301: GSGSYDVDIR NLTCGPGGHG ISIGSLGNHN SRACVSNITV RDSVIKYSDN GVRIKTWQGG SGSVSGVTFN NIHVDSVRNP IIIDQYYCMT KDCANKTSAV
401: FVSDIAYQGI KGTYDIRSPP MHFGCSDAVP CTNLTLSDIE LLPAKGEIVL DPFCWNAYGI AEELSIPPVW CLMSDPPKGL QGSLVDKCGS S

Arabidopsis Description

At1g02460 [Source:UniProtKB/TrEMBL;Acc:Q9FWX5]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.