CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400007095	Potato	cytosol	62.75	66.21
VIT_14s0060g00620.t01	Wine grape	extracellular	66.23	65.52
KRH68311	Soybean	extracellular	62.09	61.69
KRG96576	Soybean	extracellular	61.87	61.47
Solyc01g100980.2.1	Tomato	extracellular	63.62	61.34
Os01t0296200-00	Rice	extracellular	35.51	61.28
KRH69173	Soybean	extracellular	61.87	60.04
KRH31755	Soybean	extracellular	62.09	60.0
GSMUA_Achr11P...	Banana	extracellular	56.64	59.63
GSMUA_Achr9P16670_001	Banana	extracellular, plasma membrane	60.35	55.29
KRH42407	Soybean	extracellular	55.99	53.1
KRH36916	Soybean	extracellular, nucleus	54.68	52.95
KRH58524	Soybean	extracellular	56.21	52.65
KRH11881	Soybean	extracellular	54.47	52.19
HORVU1Hr1G067840.1	Barley	extracellular, plastid	53.38	51.47
TraesCS1D01G311000.1	Wheat	extracellular	53.16	50.94
TraesCS1B01G322500.1	Wheat	extracellular	53.59	50.83
TraesCS1A01G311100.1	Wheat	extracellular	53.59	50.83
GSMUA_Achr3P08400_001	Banana	extracellular	60.35	49.29
Zm00001d040589_P001	Maize	extracellular	53.38	49.1
Zm00001d009057_P001	Maize	extracellular	44.23	47.99
EES00620	Sorghum	extracellular	52.72	47.83
KRH56581	Soybean	extracellular	39.22	41.0
KRG93260	Soybean	extracellular	39.0	40.41
KRH23942	Soybean	extracellular	36.6	38.18
KRH74551	Soybean	extracellular	38.34	38.18
KRH69612	Soybean	extracellular	37.91	37.66
KRH71979	Soybean	extracellular	35.08	37.62
KRG88958	Soybean	extracellular	28.98	37.46
KRH39858	Soybean	extracellular	35.95	37.41
KRH13966	Soybean	extracellular	35.51	37.13
KRH32949	Soybean	extracellular	35.29	36.99
KRH45648	Soybean	nucleus	43.14	36.8
KRG99364	Soybean	extracellular, nucleus	42.7	36.43
KRH05150	Soybean	extracellular	20.91	35.69
KRH23567	Soybean	extracellular	30.72	35.16
KRH09752	Soybean	extracellular	34.64	34.72
KRH14715	Soybean	cytosol, extracellular, nucleus, plastid	26.14	34.58
KRH48978	Soybean	extracellular	22.44	34.56
KRH23786	Soybean	cytosol, extracellular, nucleus, plastid	27.02	34.44
KRH33163	Soybean	extracellular, plastid	35.51	34.17
KRH66955	Soybean	extracellular	34.2	33.84
KRH66273	Soybean	extracellular	22.66	33.55
KRH66276	Soybean	extracellular	25.49	32.96
KRH09740	Soybean	extracellular	30.28	32.71
KRH66305	Soybean	extracellular	26.58	31.69
KRG95273	Soybean	extracellular	35.08	30.78
KRG99363	Soybean	extracellular	37.25	19.41

Protein Annotations

Gene3D:2.160.20.10	MapMan:50.3.2	EMBL:ACUP02012162	EnsemblPlantsGene:GLYMA_19G226500	GO:GO:0003674	GO:GO:0003824
GO:GO:0004650	GO:GO:0005575	GO:GO:0005576	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	GO:GO:0016798	GO:GO:0071555	InterPro:Glyco_hydro_28
InterPro:IPR012334	UniProt:K7MZS2	EnsemblPlants:KRG96690	ProteinID:KRG96690	ProteinID:KRG96690.1	PFAM:PF00295
ScanProsite:PS00502	PANTHER:PTHR31375	PANTHER:PTHR31375:SF13	InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence
SMART:SM00710	SUPFAM:SSF51126	SignalP:SignalP-noTM	UniParc:UPI00029571DE	SEG:seg	:

Description

hypothetical protein

Coordinates

chr19:+:47822838..47825544

Molecular Weight (calculated)

50671.6 Da

IEP (calculated)

8.676

GRAVY (calculated)

-0.191

Length

459 amino acids

Sequence
(BLAST)

001: MFLQRITLFL IFITCLFFPT IRGKLHSHAN GKQWLPMSRI WLPPSPSPEV VSPNANGPFV FNVKSFGAVG DGVSDDTEAF KLAWDAACHA EESGTLFVPK
101: GHIFMIQSTT FTGPCNSKLT FKVDGTIWPP DGPDSWPLSS RKRQWLVFYR INGMLMQGSG LIDGRGEKWW NLSYKSHKGA NGAKQLGPGD RPVAIRFFES
201: SNLRVEGLKI KNSPKFHFRF DECQNVHVEK LIIKSPALSP NTDGIHIENT TNVNIHNSVI SNGDDCVSVG AGCYNVDIRN ITCGPSHGIS IGSLGNYNSR
301: ACVSNITVSD SIIKHSDNGV RIKTWQGGRG AVSKVVFNNI QMDTVRNPII IDQYYCPSKN CHNQSYAVSV SNVSYSNIKG TYDARSPPMR FACSDSVPCT
401: NLTLSEVELL PAAHSQGKIL TNPFCWKVYG TVQTLTTPHV LCLLEGNQLT LKPRDVVWC

Best Arabidopsis Sequence Match ( AT1G56710.1 )
(BLAST)

001: MSLPNSLFYT FFLILFSTIR IAQSIYLSPS PAPNPAYNDN DNIAPTVFDV TSFGAIGDCS TDDTSAFKMA WDAACMSTGP KSALLLVPYT FCFLVKPTTF
101: NGPCRTNLVL QIDGFIVSPD GPRSWPSNYQ RQWMMFYRVN GLSIQGSGVI NGRGQKWWNL PCKPHKGLNG TTQTGPCDSP VAIRLFQSSK VRIQGINFMN
201: SAQFHVRFDN CSDVVVDSVI IKAPASSPNT DGIHIENTHN VQIRNSMISN GDDCISIGAG CFNVDIKNVT CGPSHGISIG SLGVHNSQAY VSNITVTNST
301: IWNSDNGVRI KTWQGGSGSV SRIVFSNILM VNVRNPIMID QYYCQTNNCA NQTSAVIISD VLYANIKGTY DLRSPPIHFG CSDSVPCTNL TLTEVDLFPS
401: KGQHLENPFC WNAYGSMKIT VPPVYCLLDA PPDF

Arabidopsis Description

Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FXC1]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.