CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular

Predictor Summary:

plastid 3
mitochondrion 3
extracellular 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH71979	Soybean	extracellular	81.76	91.12
KRH66955	Soybean	extracellular	60.38	62.07
VIT_08s0007g07750.t01	Wine grape	extracellular	54.51	58.82
VIT_08s0007g07770.t01	Wine grape	extracellular	54.3	58.6
VIT_08s0007g07780.t01	Wine grape	extracellular	53.25	58.53
VIT_08s0007g07760.t01	Wine grape	extracellular	53.25	58.39
VIT_08s0007g08330.t01	Wine grape	extracellular	53.25	57.21
KRG95273	Soybean	extracellular	61.22	55.83
CDY48768	Canola	extracellular	50.31	55.17
Solyc04g015530.1.1	Tomato	cytosol	45.28	55.1
CDX79907	Canola	extracellular	49.9	54.71
Bra016911.1-P	Field mustard	extracellular	49.48	54.5
CDY06902	Canola	extracellular	49.27	54.27
Bra004655.1-P	Field mustard	extracellular	48.64	54.21
AT2G41850.1	Thale cress	extracellular	49.06	54.04
CDY14791	Canola	extracellular	48.85	53.81
CDX72025	Canola	extracellular	47.38	52.31
CDX67693	Canola	extracellular	47.38	52.19
Bra003286.1-P	Field mustard	extracellular	47.38	52.19
Bra007332.1-P	Field mustard	extracellular	46.96	51.85
Bra016912.1-P	Field mustard	extracellular, nucleus, peroxisome	48.64	51.79
KRH32949	Soybean	extracellular	46.75	50.91
AT3G57510.1	Thale cress	extracellular	45.91	50.81
KRH23942	Soybean	extracellular	46.54	50.45
GSMUA_Achr10P...	Banana	cytosol, extracellular, nucleus	41.93	50.38
KRH13966	Soybean	extracellular	46.33	50.34
PGSC0003DMT400070039	Potato	cytosol	42.98	50.0
KRH39858	Soybean	extracellular	45.49	49.21
Solyc10g080210.1.1	Tomato	extracellular	46.75	48.8
GSMUA_Achr1P22940_001	Banana	extracellular	44.65	48.3
HORVU0Hr1G038940.1	Barley	cytosol	40.46	47.77
KXG39856	Sorghum	extracellular	41.93	46.51
TraesCS4A01G066700.1	Wheat	extracellular	40.88	45.03
TraesCS4B01G244300.1	Wheat	extracellular	40.88	45.03
Os03t0216800-01	Rice	extracellular	41.09	44.75
TraesCS4D01G243600.1	Wheat	extracellular	40.46	44.57
Zm00001d048079_P001	Maize	extracellular	39.41	40.69
CDY61868	Canola	extracellular	46.12	40.07
KRH23567	Soybean	extracellular	33.12	39.4
KRH09752	Soybean	extracellular	37.74	39.3
KRH14715	Soybean	cytosol, extracellular, nucleus, plastid	28.51	39.19
KRH23786	Soybean	cytosol, extracellular, nucleus, plastid	29.56	39.17
KRH56581	Soybean	extracellular	35.43	38.5
CDY06100	Canola	extracellular	34.17	38.17
KRG93260	Soybean	extracellular	35.01	37.7
KRH09740	Soybean	extracellular	33.54	37.65
KRG88958	Soybean	extracellular	27.46	36.9
KRH66273	Soybean	extracellular	23.9	36.77
KRH48978	Soybean	extracellular	22.22	35.57
KRG96690	Soybean	extracellular	34.17	35.51
KRG96576	Soybean	extracellular	34.38	35.5
KRH66276	Soybean	extracellular	26.42	35.49
KRH68311	Soybean	extracellular	34.17	35.28
KRH69173	Soybean	extracellular	33.96	34.25
KRH31755	Soybean	extracellular	33.75	33.89
KRH66305	Soybean	extracellular	27.04	33.51
KRH36916	Soybean	extracellular, nucleus	32.91	33.12
KRH05150	Soybean	extracellular	18.66	33.09
KRH42407	Soybean	extracellular	33.33	32.85
KRH11881	Soybean	extracellular	32.91	32.78
KRH58524	Soybean	extracellular	33.33	32.45
KRH74551	Soybean	extracellular	31.03	32.1
KRH69612	Soybean	extracellular	30.82	31.82
KRG99364	Soybean	extracellular, nucleus	34.17	30.3
KRH45648	Soybean	nucleus	33.96	30.11
KRG99363	Soybean	extracellular	38.16	20.66

Protein Annotations

Gene3D:2.160.20.10	MapMan:21.3.5.1.1	UniProt:A0A0R0I0G8	EMBL:ACUP02006392	EnsemblPlantsGene:GLYMA_10G103200	GO:GO:0003674
GO:GO:0003824	GO:GO:0004650	GO:GO:0005575	GO:GO:0005576	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016787
GO:GO:0016798	GO:GO:0071555	InterPro:Glyco_hydro_28	InterPro:IPR012334	EnsemblPlants:KRH33163	ProteinID:KRH33163
ProteinID:KRH33163.1	PFAM:PF00295	ScanProsite:PS00502	PANTHER:PTHR31375	PANTHER:PTHR31375:SF3	InterPro:PbH1
InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SMART:SM00710	SUPFAM:SSF51126	TMHMM:TMhelix	UniParc:UPI0006ED6682

Description

hypothetical protein

Coordinates

chr10:+:21744662..21749301

Molecular Weight (calculated)

51460.7 Da

IEP (calculated)

5.128

GRAVY (calculated)

-0.178

Length

477 amino acids

Sequence
(BLAST)

001: MTRTFVNILG TSLYGAKLVI NPSHFHQTAF NTFQRASILT YAQREIKVTM ALQRHHLSLL FIMFSFVACH STVLLDGGGT FKDFIKQKST DVMSIRKFGK
101: LGDISSSLKT VNVNDYGARG DGKTDDTQAF KEAWEVACSS GGAVFVVPRK NYLLKPFTFS GPCESDIEVQ ISGIIEASEN LSDYSEDLTH WLVFDSIEKL
201: SVKGGGTIDG NGNIWWQNSC KVNEKLPCKN APTALTFYKC KDLTVEDLTI KNGQQMQVSF QNSENVQVSD LTVTAPGDSP NTDGIHVTNT QNIQISNSVI
301: GTGDDCISIV SGSKDVLATD IICGPGHGIS IGSLGAEGSK DFVSGITVKG AQLSGTTNGL RIKTWQGGSG SASNIQFQNI QMDNVANPII IDQNYCDQET
401: PCEEQTSAVQ IRNVLYQNIS GTSASDVGVQ FDCSKKFPCQ GIVLQNIDLK LEGGGEAKAS CNSVELSYRG DVNPLCP

Best Arabidopsis Sequence Match ( AT2G41850.1 )
(BLAST)

001: MARCTNLVTV FLLWALLMFS WCKASRISPN VYDHSYKRFK SDSLIKRRED ITGLRSFVRA SLRTPTTVSV SDFGAKGDGK TDDTQAFVNA WKKACSSNGA
101: VNLLVPKGNT YLLKSIQLTG PCNSILTVQI FGTLSASQKR SDYKDISKWI MFDGVNNLSV DGGDTGVVDG NGETWWQNSC KRNKAKPCTK APTALTFYNS
201: KSLIVKNLKV RNAQQIQISI EKCSNVQVSN VVVTAPADSP NTDGIHITNT QNIRVSESII GTGDDCISIE SGSQNVQIND ITCGPGHGIS IGSLGDDNSK
301: AFVSGVTVDG AKLSGTDNGV RIKTYQGGSG TASNIIFQNI QMDNVKNPII IDQDYCDKSK CTTEKSAVQV KNVVYRDISG TSASENAITF NCSKNYPCQG
401: IVLDRVNIKG GKATCTNANV VDKGAVLPQC NST

Arabidopsis Description

ADPG2Polygalacturonase ADPG2 [Source:UniProtKB/Swiss-Prot;Acc:Q8RY29]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.