Factsheet for Bra007332.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX72025	Canola	extracellular	96.76	96.76
Bra003286.1-P	Field mustard	extracellular	86.34	86.14
AT3G57510.1	Thale cress	extracellular	85.88	86.08
CDY06100	Canola	extracellular	76.16	77.05
Bra016911.1-P	Field mustard	extracellular	69.68	69.52
Bra004655.1-P	Field mustard	extracellular	68.29	68.93
Bra016912.1-P	Field mustard	extracellular, nucleus, peroxisome	67.13	64.73
Solyc04g015530.1.1	Tomato	cytosol	48.84	53.83
KRH71979	Soybean	extracellular	51.85	52.34
VIT_08s0007g07750.t01	Wine grape	extracellular	53.01	51.81
VIT_08s0007g08330.t01	Wine grape	extracellular	53.24	51.8
VIT_08s0007g07780.t01	Wine grape	extracellular	51.85	51.61
VIT_08s0007g07770.t01	Wine grape	extracellular	52.55	51.36
VIT_08s0007g07760.t01	Wine grape	extracellular	51.62	51.26
GSMUA_Achr10P...	Banana	cytosol, extracellular, nucleus	45.83	49.87
Bra029690.1-P	Field mustard	cytosol	46.76	49.75
Solyc10g080210.1.1	Tomato	extracellular	51.16	48.36
KRH66955	Soybean	extracellular	51.62	48.06
Bra001279.1-P	Field mustard	extracellular	47.92	47.37
KRH33163	Soybean	extracellular, plastid	51.85	46.96
PGSC0003DMT400070039	Potato	cytosol	44.44	46.83
KXG39856	Sorghum	extracellular	43.52	43.72
HORVU0Hr1G038940.1	Barley	cytosol	40.74	43.56
KRG95273	Soybean	extracellular	51.62	42.64
TraesCS4B01G244300.1	Wheat	extracellular	42.13	42.03
GSMUA_Achr1P22940_001	Banana	extracellular	42.82	41.95
TraesCS4D01G243600.1	Wheat	extracellular	41.9	41.8
Os03t0216800-01	Rice	extracellular	42.36	41.78
TraesCS4A01G066700.1	Wheat	extracellular	41.44	41.34
Zm00001d048079_P001	Maize	extracellular	42.82	40.04
Bra003555.1-P	Field mustard	extracellular	40.05	38.7
Bra024602.1-P	Field mustard	cytosol	39.35	38.46
Bra008572.1-P	Field mustard	extracellular	38.19	38.02
Bra016213.1-P	Field mustard	extracellular	40.74	37.69
Bra012375.1-P	Field mustard	cytosol	38.66	37.44
Bra023600.1-P	Field mustard	extracellular	37.04	37.38
Bra027926.1-P	Field mustard	extracellular	37.27	37.01
Bra025103.1-P	Field mustard	extracellular	34.26	37.0
Bra008493.1-P	Field mustard	extracellular	33.33	36.92
Bra016345.1-P	Field mustard	extracellular	39.81	36.75
Bra025099.1-P	Field mustard	extracellular	34.03	36.75
Bra008748.1-P	Field mustard	extracellular	37.27	36.67
Bra025631.1-P	Field mustard	extracellular	35.65	36.49
Bra027211.1-P	Field mustard	extracellular	35.65	34.15
Bra011341.1-P	Field mustard	cytosol	30.79	33.84
Bra000911.1-P	Field mustard	extracellular, vacuole	37.96	33.74
Bra018707.1-P	Field mustard	extracellular	36.81	33.69
Bra033328.1-P	Field mustard	extracellular	37.5	32.99
Bra027210.1-P	Field mustard	extracellular	34.72	32.89
Bra032600.1-P	Field mustard	extracellular	37.27	32.79
Bra025216.1-P	Field mustard	extracellular	35.42	32.55
Bra001605.1-P	Field mustard	extracellular	34.03	32.52
Bra031724.1-P	Field mustard	extracellular	35.19	29.51
Bra040077.1-P	Field mustard	extracellular	24.07	28.49
Bra018429.1-P	Field mustard	extracellular, golgi, vacuole	34.95	28.44
Bra027148.1-P	Field mustard	extracellular	35.19	28.36
Bra019912.1-P	Field mustard	extracellular, golgi, vacuole	34.95	28.33

Protein Annotations

Gene3D:2.160.20.10	MapMan:21.3.5.1.1	EnsemblPlantsGene:Bra007332	EnsemblPlants:Bra007332.1	EnsemblPlants:Bra007332.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0004650	GO:GO:0005575	GO:GO:0005576	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	GO:GO:0016798	GO:GO:0071555
InterPro:Glyco_hydro_28	InterPro:IPR012334	UniProt:M4CSZ0	PFAM:PF00295	ScanProsite:PS00502	PANTHER:PTHR31375
PANTHER:PTHR31375:SF3	InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SMART:SM00710	SUPFAM:SSF51126
SignalP:SignalP-noTM	UniParc:UPI0002542CEE	SEG:seg	:	:	:

Description

AT3G57510 (E=1e-212) ADPG1 | ADPG1; polygalacturonase

Coordinates

chrA09:-:28641666..28643911

Molecular Weight (calculated)

46901.0 Da

IEP (calculated)

7.497

GRAVY (calculated)

-0.497

Length

432 amino acids

Sequence
(BLAST)

001: MARCCVPLAI FLGVLLMLSW CEALSSNVDD GYGHEDGRYE SDSLIKLNND DVLTLKSSDK PTPESSTVSV SDFGAKGDGK TDDTQAFKKA WKKACSTKEV
101: TSFLVPKGKT YLLKSTQFRG PCKSLRSFQI LGTLSASTKR SDYNKDKNHW LILEHVNNLS VDGGSEGTVD GNGKIWWQNS CKIDRSKPCT KAPTALTFYN
201: LMNLNVNNLR VRNAQQIQIS VEKCNNVNIK NVEITAPGDS PNTDGIHITN TQNIRVSNSH IGTGDDCISI EDGSQNVQIN DLTCGPGHGI SIGSLGDDNS
301: KAYVSGVNVD GAKLTETDNG VRIKTYQGGS GTAKNIKFQN IRMQNVKNPI IIDQNYCDKD KCEQQDSAVQ VDNVVYRNIS GTSATDVAIT FDCSEKYTCK
401: GIVLDNVNIK GGTASCKNAN VKNQGYVSPQ CS

Best Arabidopsis Sequence Match ( AT3G57510.1 )
(BLAST)

001: MARCCRHLAV FLCVLLMLSL CKALSSNVDD GYGHEDGSFE SDSLLKLNND DVLSLISSDE TTLEASTVSV SNFGAKGDGK TDDTQAFKKA WKKACSTNGV
101: TTFLVPKGKT YLLKSTRFRG PCKSLRNFQI LGTLSASTKR SDYKDKNHWL ILEDVNNLSI DGGSTGIING NGKTWWQNSC KIDKSKPCTK APTALTLYNL
201: KNLNVKNLRV KNAQQIQISI EKCNKVEVSN VEITAPGDSP NTDGIHITNT QNIRVSNSDI GTGDDCISIE DGTQNLQIFD LTCGPGHGIS IGSLGDDNSK
301: AYVSGINVDG AKFSESDNGV RIKTYQGGSG TAKNIKFQNI RMENVKNPII IDQDYCDKDK CEDQESAVQV KNVVYKNISG TSATDVAITL NCSEKYPCQG
401: IVLENVKIKG GTASCKNANV KNQGTVSPKC S

Arabidopsis Description

ADPG1Polygalacturonase ADPG1 [Source:UniProtKB/Swiss-Prot;Acc:O23147]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.